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N2_069_000G1_scaffold_153

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_069_000G1_scaffold_153_1
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..85)
DNA (84bp) protein (28aa)
Elongation factor Tu Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D4P4_PAESJ
tufA; elongation factor Tu
Tax=GWF1_Rhodobacteraceae_65_7_curated
N2_069_000G1_scaffold_153_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103..2178)
DNA (2076bp) protein (692aa)
elongation factor P Tax=Peptoniphilus rhinitidis RepID=UPI00028A30D5
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
fusA; Elongation factor G
N2_069_000G1_scaffold_153_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2194..2664)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Peptoniphilus rhinitidis RepID=UPI000289CD7F
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpsG; 30S ribosomal protein S7
N2_069_000G1_scaffold_153_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2752..3168)
DNA (417bp) protein (139aa)
30S ribosomal protein S12 Tax=Peptoniphilus rhinitidis RepID=UPI000287ACDA
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpsL; 30S ribosomal protein S12
N2_069_000G1_scaffold_153_5
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3596..4234)
DNA (639bp) protein (213aa)
hydrolase Tax=Peptoniphilus rhinitidis RepID=UPI000288C115
hydrolase
Hydrolase {ECO:0000313|EMBL:CDZ74240.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
N2_069_000G1_scaffold_153_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4239..5357)
DNA (1119bp) protein (373aa)
iron ABC transporter ATP-binding protein Tax=Peptoniphilus rhinitidis RepID=UPI00028829D6
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CCY12562.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type spermidine/putrescine transport systems, ATPase components
N2_069_000G1_scaffold_153_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5341..7002)
DNA (1662bp) protein (554aa)
ABC transporter permease Tax=Peptoniphilus rhinitidis RepID=UPI000289A104
ABC transporter, permease protein {ECO:0000313|EMBL:EJF40575.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type Fe3+ transport system, permease component
N2_069_000G1_scaffold_153_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7015..8070)
DNA (1056bp) protein (352aa)
iron ABC transporter substrate-binding protein Tax=Peptoniphilus rhinitidis RepID=UPI0002889626
ABC transporter solute-binding protein {ECO:0000313|EMBL:CCY44403.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type Fe3+ transport system, periplasmic component
N2_069_000G1_scaffold_153_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8049..8813)
DNA (765bp) protein (255aa)
hypothetical protein Tax=Peptoniphilus rhinitidis RepID=UPI0002883D00
Uncharacterized protein {ECO:0000313|EMBL:KJF26301.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
Sugar phosphate isomerases/epimerases
N2_069_000G1_scaffold_153_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9096..12683)
DNA (3588bp) protein (1196aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' Tax=Peptoniphilus rhinitidis RepID=UPI0002892105
N2_069_000G1_scaffold_153_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12723..16472)
DNA (3750bp) protein (1250aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Peptoniphilus rhinitidis RepID=UPI0002899624
N2_069_000G1_scaffold_153_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16629..16952)
DNA (324bp) protein (108aa)
hypothetical protein Tax=Peptoniphilus rhinitidis RepID=UPI00028845BB
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33480.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
N2_069_000G1_scaffold_153_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17023..18522)
DNA (1500bp) protein (500aa)
membrane protein Tax=Peptoniphilus rhinitidis RepID=UPI000288F0BC
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
integral membrane protein MviN
N2_069_000G1_scaffold_153_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18719..19117)
DNA (399bp) protein (133aa)
phosphohistidine phosphatase Tax=Peptoniphilus rhinitidis RepID=UPI000287E160
Putative phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EFR33492.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
N2_069_000G1_scaffold_153_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19099..20409)
DNA (1311bp) protein (437aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
eno; Enolase (EC:4.2.1.11)
enolase Tax=Peptoniphilus rhinitidis RepID=UPI00028985CF
N2_069_000G1_scaffold_153_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20418..21920)
DNA (1503bp) protein (501aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
phosphoglyceromutase Tax=Peptoniphilus rhinitidis RepID=UPI0002891652
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
N2_069_000G1_scaffold_153_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21902..22585)
DNA (684bp) protein (228aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
triosephosphate isomerase Tax=Peptoniphilus rhinitidis RepID=UPI0002883BE8
N2_069_000G1_scaffold_153_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22549..23841)
DNA (1293bp) protein (431aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase Tax=Peptoniphilus rhinitidis RepID=UPI000287D451
N2_069_000G1_scaffold_153_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24039..25514)
DNA (1476bp) protein (492aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
gltX; Glutamate-tRNA ligase (EC:6.1.1.17)
glutamyl-tRNA synthetase Tax=Peptoniphilus rhinitidis RepID=UPI000289C44C
N2_069_000G1_scaffold_153_20
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(25531..27093)
DNA (1563bp) protein (521aa)
hypothetical protein Tax=Peptoniphilus rhinitidis RepID=UPI000289724A
Uncharacterized protein {ECO:0000313|EMBL:AHZ59527.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
cellulosome-anchoring protein
N2_069_000G1_scaffold_153_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27281..28606)
DNA (1326bp) protein (442aa)
adenine permease Tax=Peptoniphilus rhinitidis RepID=UPI000289012D
Putative permease {ECO:0000313|EMBL:EFR32260.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative permease MJ0326
N2_069_000G1_scaffold_153_22
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(28758..29396)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Peptoniphilus rhinitidis RepID=UPI000287E529
Uncharacterized protein {ECO:0000313|EMBL:AHZ59513.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
N2_069_000G1_scaffold_153_23
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(29378..30013)
DNA (636bp) protein (212aa)
membrane protein Tax=Peptoniphilus rhinitidis RepID=UPI00028921ED
Putative membrane protein {ECO:0000313|EMBL:AHZ59511.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
N2_069_000G1_scaffold_153_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29995..30849)
DNA (855bp) protein (285aa)
ABC transporter Tax=Peptoniphilus rhinitidis RepID=UPI0002890E79
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR32302.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ABC transporter ATP-binding protein
N2_069_000G1_scaffold_153_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30837..31226)
DNA (390bp) protein (130aa)
GntR family transcriptional regulator Tax=Peptoniphilus rhinitidis RepID=UPI00028930D8
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFR32306.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
GntR family transcriptional regulator
N2_069_000G1_scaffold_153_26
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(31333..32340)
DNA (1008bp) protein (336aa)
CAAX amino terminal protease Tax=Peptoniphilus sp. JC140 RepID=UPI00031D2D0A
CAAX amino terminal protease family protein {ECO:0000313|EMBL:AHZ59491.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
CAAX amino terminal protease family.
N2_069_000G1_scaffold_153_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32791..35490)
DNA (2700bp) protein (900aa)
ATPase Tax=Peptoniphilus rhinitidis RepID=UPI000288413A
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EFR32280.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
calcium-transporting P-type ATPase
N2_069_000G1_scaffold_153_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35714..37000)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EFR32266.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EFR32266.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
seryl-tRNA synthetase Tax=Peptoniphilus rhinitidis RepID=UPI000288D31C
seryl-tRNA synthetase
N2_069_000G1_scaffold_153_29
unknown

Not on your lists

comp(37254..37373)
DNA (120bp) protein (40aa)

This feature has no annotations

N2_069_000G1_scaffold_153_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37600..38517
DNA (918bp) protein (306aa)
nitric-oxide reductase Tax=Peptoniphilus rhinitidis RepID=UPI000289912F
ATPase, AAA family {ECO:0000313|EMBL:EFR32292.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nitric-oxide reductase
Displaying items 1-30 of 39 in total

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