ggKbase home page

N2_069_000G1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 35 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
N2_069_000G1_scaffold_253_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..500)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Escherichia coli 179100 RepID=N3HZZ9_ECOLX
tail component of prophage CP-933K
Putative phage minor tail protein {ECO:0000313|EMBL:EMD14356.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
N2_069_000G1_scaffold_253_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(506..1204)
DNA (699bp) protein (233aa)
Phage minor tail protein L Tax=Escherichia coli RepID=L3XF73_ECOLX
minor tail protein L
Putative minor tail protein {ECO:0000313|EMBL:BAI26372.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
N2_069_000G1_scaffold_253_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1204..1533)
DNA (330bp) protein (110aa)
Minor tail protein M Tax=Escherichia coli RepID=Q0TIN7_ECOL5
minor tail protein M
Phage minor tail protein {ECO:0000313|EMBL:AJA25528.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7 str. SS52.;"
N2_069_000G1_scaffold_253_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1530..4097)
DNA (2568bp) protein (856aa)
Lambda family phage tail tape measure protein Tax=Escherichia coli RepID=L3XFG7_ECOLX
minor tail protein H
Lambda family protein phage tail tape measure protein {ECO:0000313|EMBL:EGB64763.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
N2_069_000G1_scaffold_253_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4090..4524)
DNA (435bp) protein (145aa)
Tail component of prophage Tax=Escherichia coli RepID=E2QKR6_ECOLX
Minor tail protein T
Phage tail assembly protein T {ECO:0000313|EMBL:ESD32125.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4506..4928)
DNA (423bp) protein (141aa)
Tail component of prophage Tax=Escherichia coli RepID=E2QKR5_ECOLX
putative tail component of prophage CP-933X
Phage minor tail protein G {ECO:0000313|EMBL:ESD32126.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4944..5684)
DNA (741bp) protein (247aa)
Tail component of prophage Tax=Escherichia coli RepID=E2QKR4_ECOLX
tail component of prophage
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:ESD32127.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5692..6087)
DNA (396bp) protein (132aa)
Minor tail protein U Tax=Escherichia coli RepID=L3XHE7_ECOLX
minor tail U
Minor tail U {ECO:0000313|EMBL:ADX50861.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
N2_069_000G1_scaffold_253_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6084..6329)
DNA (246bp) protein (82aa)
Prophage minor tail protein Z Tax=Escherichia coli RepID=B3XA82_ECOLX
tail component of prophage CP-933X
Uncharacterized protein {ECO:0000313|EMBL:EOU78993.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
N2_069_000G1_scaffold_253_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..7026)
DNA (354bp) protein (118aa)
Tail attachment protein Tax=Escherichia coli RepID=L3XG45_ECOLX
tail attachment protein minor capsid protein FII)
Tail attachment protein {ECO:0000313|EMBL:EOV13281.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
N2_069_000G1_scaffold_253_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7038..7433)
DNA (396bp) protein (132aa)
DNA packaging protein ofprophage CP-933X Tax=Escherichia coli RepID=E2QKR0_ECOLX
DNA packaging protein from bacteriophage origin
Uncharacterized protein {ECO:0000313|EMBL:ESD32131.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7475..8500)
DNA (1026bp) protein (342aa)
Capsid protein of prophage Tax=Escherichia coli RepID=E2QKQ9_ECOLX
capsid protein of prophage
Phage major capsid protein E {ECO:0000313|EMBL:ESD32132.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8504..8887)
DNA (384bp) protein (128aa)
Head decoration protein Tax=Escherichia coli RepID=L3XHE0_ECOLX
Bacteriophage lambda head decoration D family protein {ECO:0000313|EMBL:EHW24947.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
head decoration protein (Major capsid protein)
N2_069_000G1_scaffold_253_14
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8897..10228)
DNA (1332bp) protein (444aa)
Capsid protein of prophage Tax=Escherichia coli RepID=E2QKQ7_ECOLX
Minor capsid protein C from bacteriophage origin
Minor capsid protein C {ECO:0000313|EMBL:ELC20362.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
N2_069_000G1_scaffold_253_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..11810)
DNA (1602bp) protein (534aa)
Capsid structural protein of prophage Tax=Escherichia coli RepID=E2QKQ6_ECOLX
capsid structural protein of prophage
Portal protein B {ECO:0000313|EMBL:EQP56865.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
N2_069_000G1_scaffold_253_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11807..12013)
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W Tax=root RepID=VHTJ_ECOL6
Lambda prophage-derived head-to-tail joining protein W
GpW {ECO:0000313|EMBL:EGI47277.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
N2_069_000G1_scaffold_253_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12010..13935)
DNA (1926bp) protein (642aa)
Large terminase Tax=Escherichia coli RepID=L3EXT7_ECOLX
Phage terminase large subunit {ECO:0000313|EMBL:ESD32137.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
putative terminase large subunit
N2_069_000G1_scaffold_253_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13910..14455)
DNA (546bp) protein (182aa)
Phage DNA packaging protein Nu1 Tax=Enterobacteriaceae RepID=A7ZJH7_ECO24
phage terminase small subunit
Terminase small subunit {ECO:0000313|EMBL:KEL20193.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
N2_069_000G1_scaffold_253_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14932..15285
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Escherichia RepID=E1PJH4_ECOAB
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI04250.1}; Uncharacterized protein {ECO:0000313|EMBL:AJO83101.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
N2_069_000G1_scaffold_253_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15408..15734)
DNA (327bp) protein (109aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 Tax=Escherichia RepID=E2QKQ2_ECOLX
tonB-like membrane protein
TonB family domain-containing protein {ECO:0000313|EMBL:ELE61756.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
N2_069_000G1_scaffold_253_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16215..16508
DNA (294bp) protein (98aa)
Lipoprotein bor homolog from lambdoid prophage DLP12 Tax=Escherichia RepID=E2QKQ1_ECOLX
bor; lambda prophage Bor protein
Lipoprotein bor {ECO:0000313|EMBL:KEJ47871.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
N2_069_000G1_scaffold_253_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16540..17001)
DNA (462bp) protein (154aa)
Rz endopeptidase from lambdoid prophage DLP12 Tax=Escherichia coli RepID=E2QKQ0_ECOLX
putative Rz endopeptidase from lambdoid prophage
Endopeptidase {ECO:0000313|EMBL:AJO83097.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
N2_069_000G1_scaffold_253_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16998..17531)
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
Lysozyme Tax=Escherichia coli RepID=E2QKP9_ECOLX
ydfQ; lysozyme from lambdoid prophage Qin
N2_069_000G1_scaffold_253_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17666..17905
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Escherichia coli RepID=E4P1S4_ECO8N
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD36893.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
N2_069_000G1_scaffold_253_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17902..18216)
DNA (315bp) protein (105aa)
LF82 chromosome, complete sequence Tax=Enterobacteriaceae RepID=E4UEC9_ECOLX
hypothetical protein
Phage protein {ECO:0000313|EMBL:KHJ12700.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
N2_069_000G1_scaffold_253_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18221..18436)
DNA (216bp) protein (72aa)
Lysis protein S homolog from lambdoid prophage DLP12 Tax=root RepID=ESSD_ECOL6
essD; phage lysis protein S; DLP12 prophage
Phage lysis protein {ECO:0000313|EMBL:ESP10587.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
N2_069_000G1_scaffold_253_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19026..20108
DNA (1083bp) protein (361aa)
Outer membrane porin protein nmpC Tax=Escherichia coli RepID=Q8CW50_ECOL6
nmpC; outer membrane porin
Outer membrane porin OmpD {ECO:0000313|EMBL:EQY33842.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
N2_069_000G1_scaffold_253_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20297..20680)
DNA (384bp) protein (128aa)
Antitermination protein Q homolog from lambdoid Tax=Escherichia RepID=E2QKP6_ECOLX
hypothetical protein
Putative phage antitermination protein {ECO:0000313|EMBL:BAI54602.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
N2_069_000G1_scaffold_253_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20766..20903)
DNA (138bp) protein (46aa)
Uncharacterized protein ylcG in lambdoid DLP12 prophage regi Tax=Escherichia RepID=E2QKP5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK70976.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
N2_069_000G1_scaffold_253_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20903..21265)
DNA (363bp) protein (121aa)
Crossover junction endodeoxyribonuclease rusA {ECO:0000256|PIRNR:PIRNR001007}; EC=3.1.22.4 {ECO:0000256|PIRNR:PIRNR001007};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Crossover junction endodeoxyribonuclease rusA Tax=Escherichia RepID=E2QKP4_ECOLX
rusA; Crossover junction endodeoxyribonuclease rusA
Displaying items 1-30 of 35 in total

View Taxonomy