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GD18-4_B1_scaffold_134773

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_134773_1
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2..1423
DNA (1422bp) protein (474aa)
dhd:Dhaf_0802 UDP-N-acetylmuramate/alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=84525 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
GD18-4_B1_scaffold_134773_2
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

1435..2883
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E96E2E
diaminopimelate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
GD18-4_B1_scaffold_134773_3
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2898..3518
DNA (621bp) protein (207aa)
Serine/threonine protein kinase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TK44_9CYAN
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFY82526.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
GD18-4_B1_scaffold_134773_4
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3547..6309
DNA (2763bp) protein (921aa)
hypothetical protein id=5801885 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Preprotein translocase subunit SecA
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_134773_5
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

6389..7357
DNA (969bp) protein (323aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase id=3423624 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
GD18-4_B1_scaffold_134773_6
unknown

Not on your lists

comp(7459..8700)
DNA (1242bp) protein (414aa)

This feature has no annotations

GD18-4_B1_scaffold_134773_7
unknown

Not on your lists

9053..10513
DNA (1461bp) protein (487aa)

This feature has no annotations

GD18-4_B1_scaffold_134773_8
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

10701..12803
DNA (2103bp) protein (701aa)
Protein export protein SecD n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZBR5_NODSP id=13854 bin=ACD18 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Protein translocase subunit SecD {ECO:0000313|EMBL:KKU13936.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
protein-export membrane protein SecD
GD18-4_B1_scaffold_134773_9
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12834..13730
DNA (897bp) protein (299aa)
Protein translocase subunit SecF id=1744031 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
protein-export membrane protein SecF
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
GD18-4_B1_scaffold_134773_10
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

13799..15193
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5C451
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
GD18-4_B1_scaffold_134773_11
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15218..16861
DNA (1644bp) protein (548aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR99810.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
Putative uncharacterized protein id=1987453 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
GD18-4_B1_scaffold_134773_12
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

16868..18424
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZH57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW02001.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
membrane protein of unknown function
GD18-4_B1_scaffold_134773_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(18447..20666)
DNA (2220bp) protein (740aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4BCB6
group 1 glycosyl transferase
Tax=CG_Omnitr_03
GD18-4_B1_scaffold_134773_14

Not on your lists

20735..21760
DNA (1026bp) protein (342aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN23807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PH1107-like glycosidase id=3309940 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
glycosidase-like protein
GD18-4_B1_scaffold_134773_15
unknown

Not on your lists

comp(21824..22678)
DNA (855bp) protein (285aa)

This feature has no annotations

GD18-4_B1_scaffold_134773_16
R_RIF_OD1_12_45_13b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22800..23903
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036F8AFA
thiouridylase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated
GD18-4_B1_scaffold_134773_17
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

24147..26804
DNA (2658bp) protein (886aa)
Tax=BJP_IG2102_PER_44_74
GD18-4_B1_scaffold_134773_18
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


26902..28611
DNA (1710bp) protein (570aa)
alaS2; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase id=2193061 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
GD18-4_B1_scaffold_134773_19
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

28739..28969
DNA (231bp) protein (77aa)
hypothetical protein id=5801915 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
infA; translation initiation factor IF-1
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
GD18-4_B1_scaffold_134773_20
GWC2_OD1_45_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


29121..29510
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=uncultured bacterium RepID=K1Y6D3_9BACT
30S ribosomal protein S13 {ECO:0000313|EMBL:KKU14108.1}; TaxID=1619050 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_45_8.;"
SSU ribosomal protein S13P
GD18-4_B1_scaffold_134773_21
GWA2_OD1_41_55_partial, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


29516..29929
DNA (414bp) protein (138aa)
30S ribosomal protein S11 {ECO:0000313|EMBL:KKS13006.1}; TaxID=1619038 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_41_55.;"
SSU ribosomal protein S11P id=2008994 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S11
GD18-4_B1_scaffold_134773_22
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


29980..30585
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS4_HALOH
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
GD18-4_B1_scaffold_134773_23
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

30613..31449
DNA (837bp) protein (279aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B4A745
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
GD18-4_B1_scaffold_134773_24
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists


31468..31833
DNA (366bp) protein (122aa)
hypothetical protein id=5801920 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
rplQ; 50S ribosomal protein L17
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
GD18-4_B1_scaffold_134773_25
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


31839..32219
DNA (381bp) protein (127aa)
50S ribosomal protein L13 id=1987439 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L13
Tax=CG_Falkow_03
GD18-4_B1_scaffold_134773_26
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


32229..32684
DNA (456bp) protein (152aa)
30S ribosomal protein S9 n=1 Tax=Clostridium sp. CAG:798 RepID=R6YFQ8_9CLOT
rpsI; 30S ribosomal protein S9
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
GD18-4_B1_scaffold_134773_27
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

32800..34260
DNA (1461bp) protein (487aa)
Polysaccharide biosynthesis protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2AYX9_9BACT
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
GD18-4_B1_scaffold_134773_28
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

34257..35369
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B590E9
group 1 glycosyl transferase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
GD18-4_B1_scaffold_134773_29
CG_CPR02_01, CG_CPR02, Bacteria

Not on your lists

35377..36108
DNA (732bp) protein (244aa)
glycosyl transferase family 2 id=99482 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
glycosyl transferase family protein
Tax=CG_CPR02_01
GD18-4_B1_scaffold_134773_30
R_RIF_OD1_05_43_15b, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

comp(36105..36749)
DNA (645bp) protein (215aa)
tRNA pseudouridine synthase B id=1816798 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
tRNA pseudouridine synthase B
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_05_43_15b_curated
Displaying items 1-30 of 163 in total

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