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S_p1_S3_coassembly_k141_1215867

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1215867_1
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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comp(153..3314)
DNA (3162bp) protein (1054aa)
DNA-directed RNA polymerase subunit beta bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA-directed RNA polymerase subunit beta
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1215867_2
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3612..3866)
DNA (255bp) protein (85aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1215867_3
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3971..5068)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rod shape-determining protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1215867_4
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5234..6043)
DNA (810bp) protein (270aa)
id=1915904 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1215867_5
unknown

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comp(6077..6238)
DNA (162bp) protein (54aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1215867_6
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

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comp(7037..7510)
DNA (474bp) protein (158aa)
Homing endonuclease bin=GWC1_OD1_38_17 species=Synechococcus sp. C9 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
site-specific DNA endonuclease
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
S_p1_S3_coassembly_k141_1215867_7
unknown

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7953..8174
DNA (222bp) protein (74aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1215867_8
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

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comp(8583..8765)
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
S_p1_S3_coassembly_k141_1215867_9
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9170..9772)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU04950.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_45_21.;"
id=2722906 bin=GWC1_OD1_38_17 species=Trebouxiophyceae sp. MX-AZ01 genus=unknown taxon_order=unknown taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
LAGLIDADG homing endonuclease
S_p1_S3_coassembly_k141_1215867_10
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(10216..10878)
DNA (663bp) protein (221aa)
Homing endonuclease Tax=uncultured candidate division OP1 bacterium RepID=H5SRB9_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S_p1_S3_coassembly_k141_1215867_11
unknown

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comp(11469..11615)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 11 items

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