ggKbase home page

S_p1_S3_coassembly_k141_1818500

Search features with annotation key words

Displaying items 1-30 of 312 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1818500_trna_6
unknown

Not on your lists

comp(146..216)
DNA (71bp)
transferRNA Gln
S_p1_S3_coassembly_k141_1818500_1
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(279..662)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DSW8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_2
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(683..2152)
DNA (1470bp) protein (490aa)
Glutamate--tRNA ligase Tax=uncultured bacterium RepID=K2D8F1_9BACT
glutamyl/glutaminyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_3
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2176..3225
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CVG8_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_4
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3194..4126)
DNA (933bp) protein (311aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CVX1_9BACT
DacC3; D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_5
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(4149..5468)
DNA (1320bp) protein (440aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CAJ5_9BACT
aspartyl-tRNA synthetase, archaeal type
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_6
unknown

Not on your lists

5883..6203
DNA (321bp) protein (107aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_7
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

6240..8078
DNA (1839bp) protein (613aa)
tye:THEYE_A0954 transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
transketolase (EC:2.2.1.1)
Tax=CG_Nitrosp_02
S_p1_S3_coassembly_k141_1818500_8
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8255..9076
DNA (822bp) protein (274aa)
3-deoxy-7-phosphoheptulonate synthase Tax=Pyrococcus sp. ST04 RepID=I3RG38_9EURY
3-deoxy-7-phosphoheptulonate synthase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_9
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

9227..10162
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DSW4_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
S_p1_S3_coassembly_k141_1818500_10
unknown

Not on your lists

10418..10855
DNA (438bp) protein (146aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_11
unknown

Not on your lists

10794..11159
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_12
unknown

Not on your lists

11196..11453
DNA (258bp) protein (86aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_13
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11431..13008)
DNA (1578bp) protein (526aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CFS7_9BACT
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_14
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13076..14410
DNA (1335bp) protein (445aa)
tde:TDE1033 polyA polymerase family protein; K00970 poly(A) polymerase [EC:2.7.7.19] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_15
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(14413..15288)
DNA (876bp) protein (292aa)
Protein-export membrane protein SecF Tax=uncultured bacterium RepID=K2DE75_9BACT
Protein translocase subunit SecF
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_16
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15312..15662)
DNA (351bp) protein (117aa)
coiled-coil 81..102 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_17
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15659..16531)
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CFT5_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_18
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(16543..17862)
DNA (1320bp) protein (440aa)
Protein translocase subunit SecD Tax=uncultured bacterium RepID=K2CFN4_9BACT
protein-export membrane protein SecD
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_19
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17888..18478)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BWM7_9BACT
Transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_20
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18509..19690)
DNA (1182bp) protein (394aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_21
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19695..20168)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CUJ0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_22
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20218..20898)
DNA (681bp) protein (227aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_23
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21291..21431
DNA (141bp) protein (47aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG67_9EURY bin=ACD38 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_24
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(21799..22767)
DNA (969bp) protein (323aa)
protein of unknown function UPF0118 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_1818500_25
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(22764..23723)
DNA (960bp) protein (320aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDR2_9FIRM bin=ACD38 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_26
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(23736..24728)
DNA (993bp) protein (331aa)
Putative uncharacterized protein Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09CN5_STIAU bin=ACD30 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
S_p1_S3_coassembly_k141_1818500_27
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

24940..25926
DNA (987bp) protein (329aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_1818500_28

Not on your lists

25901..27121
DNA (1221bp) protein (407aa)
Glycosyl transferase family 39 Tax=uncultured bacterium RepID=K2DFH4_9BACT
Glycosyl transferase family 39 {ECO:0000313|EMBL:EKD85194.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycosyl transferase family protein
S_p1_S3_coassembly_k141_1818500_29
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(27118..27813)
DNA (696bp) protein (232aa)
ABC transporter permease bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
conserved membrane protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
Displaying items 1-30 of 312 in total

View Taxonomy