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S_p1_S3_coassembly_k141_536867

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_536867_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_2
unknown

Not on your lists

comp(111..1514)
DNA (1404bp) protein (468aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_3
unknown

Not on your lists

1625..2350
DNA (726bp) protein (242aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_4
unknown

Not on your lists

2347..3075
DNA (729bp) protein (243aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_5
unknown

Not on your lists

3075..3860
DNA (786bp) protein (262aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_6
unknown

Not on your lists

3860..4591
DNA (732bp) protein (244aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_7
unknown

Not on your lists

4591..5412
DNA (822bp) protein (274aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_8
unknown

Not on your lists

5431..6132
DNA (702bp) protein (234aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_9
unknown

Not on your lists

6174..6662
DNA (489bp) protein (163aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_10
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

Not on your lists

comp(6745..7191)
DNA (447bp) protein (149aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
S_p1_S3_coassembly_k141_536867_11
unknown

Not on your lists

comp(7359..7928)
DNA (570bp) protein (190aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_12
unknown

Not on your lists

comp(7991..8401)
DNA (411bp) protein (137aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_13
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8453..9379)
DNA (927bp) protein (309aa)
NAD-dependent epimerase/dehydratase Tax=Hydrogenobaculum RepID=M1RKT3_9AQUI
nucleoside-diphosphate-sugar epimerase
NAD-dependent dehydratase {ECO:0000313|EMBL:AKC79521.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
S_p1_S3_coassembly_k141_536867_14
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(9592..9828)
DNA (237bp) protein (79aa)
30S ribosomal protein S28e Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RS28_AERPE bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S28e
Tax=AR20
S_p1_S3_coassembly_k141_536867_15
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(9994..10482)
DNA (489bp) protein (163aa)
hypothetical protein Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035ECCDF
rpl7ae; 50S ribosomal protein L7Ae
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_536867_16
unknown

Not on your lists

10635..11207
DNA (573bp) protein (191aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_17
unknown

Not on your lists

11269..11634
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_18
unknown

Not on your lists

comp(11651..12079)
DNA (429bp) protein (143aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_19
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(12119..13798)
DNA (1680bp) protein (560aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=SYE_PYRAB
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_536867_20
unknown

Not on your lists

13948..14517
DNA (570bp) protein (190aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_21
Thalassiosira pseudonana, Thalassiosira, Thalassiosirales, Coscinodiscophyceae, Bacillariophyta, Eukaryota

Not on your lists

14572..15543
DNA (972bp) protein (324aa)
Predicted protein Tax=Thalassiosira pseudonana RepID=B8BUQ4_THAPS
Uncharacterized protein {ECO:0000313|EMBL:EED95326.1}; species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.;" source="Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).;"
S_p1_S3_coassembly_k141_536867_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15555..16289)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
Phosphoesterase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_536867_23

Not on your lists

comp(16291..18879)
DNA (2589bp) protein (863aa)
Uncharacterized ATP-dependent helicase MTH_1802 {ECO:0000313|EMBL:CEG12170.1}; EC=3.6.4.- {ECO:0000313|EMBL:CEG12170.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
DEAD/H associated domain protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/H associated protein
S_p1_S3_coassembly_k141_536867_24
unknown

Not on your lists

19031..19342
DNA (312bp) protein (104aa)

This feature has no annotations

S_p1_S3_coassembly_k141_536867_25
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

19428..20606
DNA (1179bp) protein (393aa)
Arginine deiminase Tax=Thiorhodovibrio sp. 970 RepID=H8YXA0_9GAMM
Arginine deiminase {ECO:0000313|EMBL:KKP54090.1}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
amidinotransferase
S_p1_S3_coassembly_k141_536867_26
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20615..22105
DNA (1491bp) protein (497aa)
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
Arginine decarboxylase Tax=planctomycete KSU-1 RepID=I3IJ25_9PLAN
Orn/DAP/Arg decarboxylase 2, N-terminal protein
S_p1_S3_coassembly_k141_536867_27
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(22118..24076)
DNA (1959bp) protein (653aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strain NA1).;"
Arginine--tRNA ligase Tax=Thermococcus onnurineus (strain NA1) RepID=B6YU50_THEON
argS; arginyl-tRNA synthetase
S_p1_S3_coassembly_k141_536867_28
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

24249..24620
DNA (372bp) protein (124aa)
sulfurtransferase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4555C
sulfurtransferase
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
S_p1_S3_coassembly_k141_536867_29

Not on your lists

comp(24621..25583)
DNA (963bp) protein (321aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; species="Archaea.;" source="archaeon GW2011_AR19.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_536867_30
RBG_13_OP11_Woesebacteria_34_9_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(25565..26620)
DNA (1056bp) protein (352aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
aspartate racemase
Tax=RBG_13_OP11_Woesebacteria_34_9_curated
Displaying items 1-30 of 65 in total

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