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S_p1_S3_coassembly_k141_1980594

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1980594_1
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(3..1655)
DNA (1653bp) protein (551aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent protease Lon
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1980594_2

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comp(1749..2021)
DNA (273bp) protein (91aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003813B47
Uncharacterized protein {ECO:0000313|EMBL:KHO50522.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
S_p1_S3_coassembly_k141_1980594_3

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2124..2777
DNA (654bp) protein (218aa)
TraB family protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Pheromone shutdown protein (TraB) {ECO:0000313|EMBL:AIF09439.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_37_C11.;"
TraB family protein
S_p1_S3_coassembly_k141_1980594_4
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2809..5028
DNA (2220bp) protein (740aa)
DEAD/DEAH box helicase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQN5_THELI
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AIF69703.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
S_p1_S3_coassembly_k141_1980594_5
unknown

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comp(5208..5627)
DNA (420bp) protein (140aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1980594_6

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comp(5660..7060)
DNA (1401bp) protein (467aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_37_C11.;"
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_1980594_7
RBG_16_OP11_Woesebacteria_42_24_curated, Woesebacteria, Microgenomates, Bacteria

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comp(7203..8573)
DNA (1371bp) protein (457aa)
Tax=RBG_16_OP11_Woesebacteria_42_24_curated
S_p1_S3_coassembly_k141_1980594_8

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comp(8607..9815)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037374F8
ORC1-type DNA replication protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_1980594_9
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

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10270..10860
DNA (591bp) protein (197aa)
Ham1 family protein Tax=Clostridium sp. CAG:354 RepID=R7F5I2_9CLOT
Ham1 family protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
S_p1_S3_coassembly_k141_1980594_10

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comp(11043..11354)
DNA (312bp) protein (104aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61712.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_1980594_11
unknown

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11532..11918
DNA (387bp) protein (129aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1980594_12
CG_Woesearch_01, Woesearchaeota, Archaea

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12025..15465
DNA (3441bp) protein (1147aa)
DNA polymerase II large subunit bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase II large subunit
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1980594_13

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15469..16266
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF09430.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_37_C11.;"
S_p1_S3_coassembly_k141_1980594_14
AR11, Woesearchaeaota, DPANN, Archaea

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16383..17075
DNA (693bp) protein (231aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S_p1_S3_coassembly_k141_1980594_15
AR20, Woesearchaeaota, DPANN, Archaea

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comp(17114..18319)
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Tax=AR20
S_p1_S3_coassembly_k141_1980594_16
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(18350..18634)
DNA (285bp) protein (95aa)
S-layer-like domain-containing protein bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
S_p1_S3_coassembly_k141_1980594_17
unknown

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18735..19868
DNA (1134bp) protein (378aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1980594_18
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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19941..20390
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Vibrio nigripulchritudo SFn118 RepID=U4GKH2_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:CCN41909.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
N-acetyltransferase GCN5
S_p1_S3_coassembly_k141_1980594_19
unknown

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comp(20391..20738)
DNA (348bp) protein (116aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1980594_20
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(20728..21285)
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
2'-5' RNA ligase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KR21_ARCVS
2'-5' RNA ligase
S_p1_S3_coassembly_k141_1980594_21
unknown

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21322..21462
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1980594_22
CG_CPArch01-01, CG_CPArch01, Archaea

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21493..22032
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN2_9EURY
dephospho-CoA kinase
Tax=CG_CPArch01-01
S_p1_S3_coassembly_k141_1980594_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22118..22381
DNA (264bp) protein (88aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PRC-barrel protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1980594_24
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(22438..23430)
DNA (993bp) protein (331aa)
Sodium/phosphate symporter Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AII9_PYRYC
Sodium/phosphate symporter
Sodium/phosphate symporter {ECO:0000313|EMBL:AEH24355.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
S_p1_S3_coassembly_k141_1980594_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23431..24357)
DNA (927bp) protein (309aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Nucleoside-diphosphate-sugar epimerase Tax=halophilic archaeon J07HX64 RepID=U1QNJ4_9EURY
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ERH08628.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
S_p1_S3_coassembly_k141_1980594_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(24357..25529)
DNA (1173bp) protein (391aa)
UDP-sulfoquinovose synthase (EC:3.13.1.1)
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:AFU58422.1}; EC=3.13.1.1 {ECO:0000313|EMBL:AFU58422.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
UDP-sulfoquinovose synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH4_NITGG
S_p1_S3_coassembly_k141_1980594_27
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(25586..26521)
DNA (936bp) protein (312aa)
sat; sulfate adenylyltransferase (EC:2.7.7.4)
mev:Metev_0880 sulfate adenylyltransferase (EC:2.7.7.4); K00958 sulfate adenylyltransferase [EC:2.7.7.4] bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
Displaying 27 items

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