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S_p1_S3_coassembly_k141_764733

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_764733_1
AR6, Pacearchaeaota, DPANN, Archaea

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25..657
DNA (633bp) protein (211aa)
Tax=AR6
S_p1_S3_coassembly_k141_764733_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(714..2144)
DNA (1431bp) protein (477aa)
Protein translocase subunit SecY Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_764733_3

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comp(2247..2717)
DNA (471bp) protein (157aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
S_p1_S3_coassembly_k141_764733_4

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comp(2719..3135)
DNA (417bp) protein (139aa)
50S ribosomal protein L30P Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL30_ARCFU
Marine sediment metagenome DNA, contig: S01H1_L01049 {ECO:0000313|EMBL:GAF74108.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpl30p; 50S ribosomal protein L30P
S_p1_S3_coassembly_k141_764733_5
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(3132..3878)
DNA (747bp) protein (249aa)
30S ribosomal protein S5 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036370A2
30S ribosomal protein S5
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_764733_6

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comp(3871..4368)
DNA (498bp) protein (166aa)
50S ribosomal protein L18P Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HME9_ACIS0
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L18
S_p1_S3_coassembly_k141_764733_7

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comp(4386..4796)
DNA (411bp) protein (137aa)
50S ribosomal protein L19e Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKL28863.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L19e
S_p1_S3_coassembly_k141_764733_8

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comp(4783..5169)
DNA (387bp) protein (129aa)
50S ribosomal protein L32, large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO55522.1}; species="Archaea.;" source="archaeon GW2011_AR19.;"
S_p1_S3_coassembly_k141_764733_9

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comp(5171..5713)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 Tax=Thermococcus RepID=RL6_PYRKO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12604.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
S_p1_S3_coassembly_k141_764733_10
unknown

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comp(5715..6095)
DNA (381bp) protein (127aa)

This feature has no annotations

S_p1_S3_coassembly_k141_764733_11

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comp(6097..6477)
DNA (381bp) protein (127aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12722.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_764733_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(6479..6709)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
Tax=RBG_13_Pacearchaeota_33_26_curated
S_p1_S3_coassembly_k141_764733_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(6711..7238)
DNA (528bp) protein (176aa)
50S ribosomal protein L5 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CFB8D
50S ribosomal protein L5
Tax=RBG_13_Pacearchaeota_33_26_curated
S_p1_S3_coassembly_k141_764733_14
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(7238..7933)
DNA (696bp) protein (232aa)
30S ribosomal protein S4 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000369DAD4
30S ribosomal protein S4e
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_764733_15

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comp(7923..8360)
DNA (438bp) protein (146aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L24P
S_p1_S3_coassembly_k141_764733_16

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comp(8362..8763)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P
S_p1_S3_coassembly_k141_764733_17

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comp(8760..9125)
DNA (366bp) protein (122aa)
30S ribosomal protein S17P Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJ18_9EURY
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S17P
S_p1_S3_coassembly_k141_764733_18
AR13, Pacearchaeaota, DPANN, Archaea

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comp(9127..9426)
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
translation initiation factor SUI1
Tax=AR13
S_p1_S3_coassembly_k141_764733_19
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(9474..9659)
DNA (186bp) protein (62aa)
Tax=CG_Pacearch_02
S_p1_S3_coassembly_k141_764733_20

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comp(9652..10344)
DNA (693bp) protein (231aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GQ31_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99760.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
S_p1_S3_coassembly_k141_764733_21
unknown

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comp(10378..10701)
DNA (324bp) protein (108aa)

This feature has no annotations

S_p1_S3_coassembly_k141_764733_22

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comp(10703..11242)
DNA (540bp) protein (180aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
S_p1_S3_coassembly_k141_764733_23

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comp(11245..11643)
DNA (399bp) protein (133aa)
30S ribosomal protein S19 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RS19_METBF
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S15e (S19p)
S_p1_S3_coassembly_k141_764733_24

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comp(11689..12390)
DNA (702bp) protein (234aa)
50S ribosomal protein L2 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=RL2_METBU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12617.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2
S_p1_S3_coassembly_k141_764733_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(12433..12675)
DNA (243bp) protein (81aa)
50S ribosomal protein L23P
50S ribosomal protein L23P bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_764733_26

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comp(12672..13328)
DNA (657bp) protein (219aa)
Putative uncharacterized protein (Fragment) Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWQ8_9EURY
Marine sediment metagenome DNA, contig: S01H1_L04355 {ECO:0000313|EMBL:GAF84066.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_764733_27

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comp(13325..14167)
DNA (843bp) protein (281aa)
50S ribosomal protein L4 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12713.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
S_p1_S3_coassembly_k141_764733_28
unknown

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comp(14169..14486)
DNA (318bp) protein (106aa)

This feature has no annotations

S_p1_S3_coassembly_k141_764733_29

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comp(14483..15436)
DNA (954bp) protein (318aa)
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS11696.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
S_p1_S3_coassembly_k141_764733_30
unknown

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comp(15547..15939)
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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