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alan_book_18_scaffold_127525

Search features with annotation key words

Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
alan_book_18_scaffold_127525_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

alan_book_18_scaffold_127525_2
GWA2_OD1_39_10_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

397..1077
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GBE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ90903.1}; TaxID=1618611 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_39_10.;"
Rhs element Vgr family protein
alan_book_18_scaffold_127525_3
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1570..2016)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIN2_9BACT
S23 ribosomal protein.
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
alan_book_18_scaffold_127525_4
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

2121..3014
DNA (894bp) protein (298aa)
hypothetical protein id=5801953 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RNA-directed DNA polymerase
Tax=GWB1_OD1_49_6_curated
alan_book_18_scaffold_127525_5
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


3344..4045
DNA (702bp) protein (234aa)
50S ribosomal protein L3 id=3158289 bin=GWC1_CPR2_39_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L3
Tax=CG_CPR17-01
alan_book_18_scaffold_127525_6
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists


4042..4713
DNA (672bp) protein (224aa)
50S ribosomal protein L4 n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIN5_THEPS
rplD; 50S ribosomal protein L4
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
alan_book_18_scaffold_127525_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


4710..5000
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Paracoccus sp. N5 RepID=UPI00036FFC48
ribosomal protein L23
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alan_book_18_scaffold_127525_8
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


5000..5833
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B303FB
rplB; 50S ribosomal protein L2
Tax=BJP_IG2158_Anaerolineales_38_74
alan_book_18_scaffold_127525_9
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


5830..6111
DNA (282bp) protein (94aa)
Ribosomal protein S19 id=2441113 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsS; ribosomal protein S19 (BS19)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
alan_book_18_scaffold_127525_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


6111..6506
DNA (396bp) protein (132aa)
50S ribosomal protein L22 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGA9_9FIRM
rplV; 50S ribosomal protein L22
Tax=CG_Dehalo_02
alan_book_18_scaffold_127525_11
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


6506..7123
DNA (618bp) protein (206aa)
30S ribosomal protein S3 id=2394495 bin=GWD1_TM7_39_7 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
30S ribosomal protein S3
Tax=CG_CPR17-01
alan_book_18_scaffold_127525_12
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


7136..7567
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RXE2_9BACT
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
alan_book_18_scaffold_127525_13
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


7557..7760
DNA (204bp) protein (68aa)
50S ribosomal protein L29
50S ribosomal protein L29 id=2151943 bin=GWD2_CPR2_39_7 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
alan_book_18_scaffold_127525_14
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7753..8004
DNA (252bp) protein (84aa)
30S ribosomal protein S17 n=2 Tax=Peptoniphilus RepID=D1VTL7_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
rpsQ; 30S ribosomal protein S17
alan_book_18_scaffold_127525_15
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists


8001..8369
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=31742 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RBG_13_Chloroflexi_56_8_curated
alan_book_18_scaffold_127525_16
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8373..8735
DNA (363bp) protein (121aa)
50S ribosomal protein L24 n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WSY4_9BACI
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
alan_book_18_scaffold_127525_17
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8732..9280
DNA (549bp) protein (183aa)
50S ribosomal protein L5 n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7REH0_ANAPD
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
alan_book_18_scaffold_127525_18
RHI_Saccharibacteria_49_19, Candidatus Saccharibacteria, Bacteria

Not on your lists


9280..9549
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2S5K4_9BACL
30S ribosomal protein S14p
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_49_19_curated
alan_book_18_scaffold_127525_19
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


9563..9958
DNA (396bp) protein (132aa)
hypothetical protein id=5801565 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
30S ribosomal protein S8
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
alan_book_18_scaffold_127525_20
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


10009..10512
DNA (504bp) protein (168aa)
UPI0003D650D6 related cluster n=1 Tax=unknown RepID=UPI0003D650D6
50S ribosomal protein L6
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
alan_book_18_scaffold_127525_21
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists


10516..10869
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) RepID=D1AVG2_STRM9
50S ribosomal protein L18 {ECO:0000313|EMBL:KKT95321.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
50S ribosomal protein L18
alan_book_18_scaffold_127525_22

Not on your lists


10878..11348
DNA (471bp) protein (157aa)
ribosomal protein S5 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20C7 id=85852 bin=ACD57 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S5
alan_book_18_scaffold_127525_23
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists


11348..11875
DNA (528bp) protein (176aa)
50S ribosomal protein L15 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X5_9FIRM
LSU ribosomal protein L15P
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
alan_book_18_scaffold_127525_24
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists


11892..13211
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY id=2152014 bin=GWD2_CPR2_39_7 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
secY; preprotein translocase subunit
Tax=GWC2_CPR2_39_35
alan_book_18_scaffold_127525_25
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13212..13538
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RF36_FRAAA
NIPSNAP family protein {ECO:0000313|EMBL:ETX08470.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
alan_book_18_scaffold_127525_26
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13559..13942
DNA (384bp) protein (128aa)
id=1816710 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
alan_book_18_scaffold_127525_27
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists

14009..14230
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 id=3239707 bin=GWC1_TM7_41_48 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC1_TM7_41_48 organism_group=TM7
infA; translation initiation factor IF-1
Tax=GWC2_CPR2_39_35
alan_book_18_scaffold_127525_28
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists


14369..14755
DNA (387bp) protein (129aa)
Ribosomal protein S13 id=2333349 bin=GWD1_TM7_39_7 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
30S ribosomal protein S13 {ECO:0000313|EMBL:KKS08857.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
30S ribosomal protein S13
alan_book_18_scaffold_127525_29
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


14768..15160
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=2 Tax=Dialister RepID=H1D145_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
30S ribosomal protein S11
alan_book_18_scaffold_127525_30
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists


15164..15775
DNA (612bp) protein (204aa)
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
ribosomal protein S4 id=4440371 bin=GWC2_TM7_48_9 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Displaying items 1-30 of 256 in total

View Taxonomy