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NECEvent2014_10_1_scaffold_5

Alias: Felix_001_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_5_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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530..1801
DNA (1272bp) protein (424aa)
Transport protein n=28 Tax=Escherichia RepID=G0D5W7_ECOLX rbh
yhjV; Transport protein
Serine transporter {ECO:0000313|EMBL:CDL50401.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli I
NECEvent2014_10_1_scaffold_5_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1831..2835)
DNA (1005bp) protein (335aa)
Dipeptide transport ATP-binding protein DppF n=28 Tax=Escherichia RepID=G0D5W8_ECOLX rbh
dppE; dipeptide transport ATP-binding protein DppF
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEJ54872.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_10_1_scaffold_5_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2832..3815)
DNA (984bp) protein (328aa)
Dipeptide transport ATP-binding protein dppD n=363 Tax=Escherichia RepID=E2QGP9_ECOLX rbh
dppD; dipeptide transporter ATP-binding subunit rbh
Dipeptide transporter ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CAR05170.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_10_1_scaffold_5_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3826..4728)
DNA (903bp) protein (301aa)
Dipeptide transport system permease protein DppC n=1353 Tax=Bacteria RepID=DPPC_ECO57 rbh
dppC; dipeptide transporter
Dipeptide transport system permease protein dppC {ECO:0000313|EMBL:END88116.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_10_1_scaffold_5_5
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..5757)
DNA (1020bp) protein (340aa)
Dipeptide transport system permease protein DppB n=1144 Tax=Enterobacteriaceae RepID=DPPB_ECO57 rbh
dppB; dipeptide transport system permease DppB
Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CAQ91013.1}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
NECEvent2014_10_1_scaffold_5_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6064..7671)
DNA (1608bp) protein (536aa)
Periplasmic dipeptide transport protein n=393 Tax=Escherichia RepID=E2QGQ2_ECOLX rbh
Periplasmic dipeptide transporter {ECO:0000313|EMBL:ELJ67043.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
dppA; dipeptide ABC transporter periplasmic-binding protein
NECEvent2014_10_1_scaffold_5_trna_2
unknown

Not on your lists

comp(8418..8491)
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_5_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8583..10274)
DNA (1692bp) protein (564aa)
UPF0141 inner membrane protein yhjW n=202 Tax=Escherichia coli RepID=E2QGQ3_ECOLX rbh
KDO phosphoethanolamine transferase, Ca(2+)-inducible {ECO:0000313|EMBL:AEQ14805.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
eptB; phosphoethanolamine transferase
NECEvent2014_10_1_scaffold_5_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10598..11806)
DNA (1209bp) protein (403aa)
Oxalate/formate antiporter protein n=323 Tax=Escherichia RepID=D2NCE7_ECOS5 rbh
hypothetical protein
Oxalate/formate antiporter protein {ECO:0000313|EMBL:BAI56922.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_10_1_scaffold_5_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..12733)
DNA (699bp) protein (233aa)
Uncharacterized protein n=197 Tax=Escherichia RepID=G7R2H5_ECOC2 rbh
yhjY; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMD06959.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_5_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12891..13454
DNA (564bp) protein (188aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:EZJ48402.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EZJ48402.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
DNA-3-methyladenine glycosylase I n=210 Tax=Escherichia coli RepID=Q8FCF5_ECOL6 rbh
tag; 3-methyladenine DNA glycosylase
NECEvent2014_10_1_scaffold_5_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13451..13891
DNA (441bp) protein (147aa)
Uncharacterized protein n=62 Tax=Escherichia coli RepID=D2NCF0_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56925.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_5_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13860..16193)
DNA (2334bp) protein (778aa)
Biotin sulfoxide reductase n=1 Tax=Escherichia coli KTE165 RepID=L4L4N0_ECOLX rbh
Biotin sulfoxide reductase {ECO:0000313|EMBL:CDN84307.1}; BisC protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
bisC; biotin sulfoxide reductase
NECEvent2014_10_1_scaffold_5_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16346..17005
DNA (660bp) protein (220aa)
Uncharacterized protein n=140 Tax=Escherichia coli RepID=D2NCF2_ECOS5 rbh
OmpA family protein
Inner membrane lipoprotein yiaD {ECO:0000313|EMBL:EQX24696.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_10_1_scaffold_5_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17109..18083
DNA (975bp) protein (325aa)
tkrA; 2-ketoaldonate reductase (EC:1.1.1.215)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000256|HAMAP-Rule:MF_01667, ECO:0000256|SAAS:SAAS00010468}; EC=1.1.1.79 {ECO:0000256|HAMAP-Rule:MF_01667, ECO:0000256|SAAS:SAAS00010467};; EC=1.1.1.81 {ECO
Glyoxylate/hydroxypyruvate reductase B n=18 Tax=Escherichia coli RepID=G0D5Y1_ECOLX rbh
NECEvent2014_10_1_scaffold_5_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18133..18843)
DNA (711bp) protein (237aa)
Uncharacterized protein YiaF n=1044 Tax=Enterobacteriaceae RepID=YIAF_ECO57 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYV15470.1}; TaxID=1446596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_5_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19277..19567
DNA (291bp) protein (97aa)
Uncharacterized HTH-type transcriptional regulator YiaG n=1398 Tax=Enterobacteriaceae RepID=YIAG_ECO57
yiaG; putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CDK49153.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_5_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19848..20060
DNA (213bp) protein (71aa)
Cold shock protein CspA n=2143 Tax=Bacteria RepID=CSPA_ECO57
RNA chaperone/anti-terminator
7.4 kDa cold shock protein {ECO:0000313|EMBL:EFJ79159.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_5_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20248..20400)
DNA (153bp) protein (51aa)
Uncharacterized protein n=63 Tax=Escherichia RepID=D2NCF7_ECOS5
hokA; Toxic polypeptide, samll
Hok/gef family protein {ECO:0000313|EMBL:EGB61468.1}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_10_1_scaffold_5_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20722..22791)
DNA (2070bp) protein (690aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
Glycine--tRNA ligase beta subunit n=530 Tax=Escherichia RepID=SYGB_ECO27 rbh
NECEvent2014_10_1_scaffold_5_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22801..23712)
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=1338 Tax=Enterobacteriaceae RepID=SYGA_CITK8 rbh
glyQ; glycyl-tRNA synthetase subunit alpha
NECEvent2014_10_1_scaffold_5_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23807..24106)
DNA (300bp) protein (100aa)
Uncharacterized lipoprotein YsaB n=308 Tax=Escherichia RepID=YSAB_ECOUT
ysaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR05187.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_5_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24281..25276
DNA (996bp) protein (332aa)
Uncharacterized protein n=41 Tax=Escherichia coli RepID=D2NCG1_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56936.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_5_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25318..25755)
DNA (438bp) protein (146aa)
Inner membrane protein yiaA n=311 Tax=Escherichia coli RepID=E2QGS4_ECOLX
yiaA; Inner membrane protein yiaA
Inner membrane protein yiaA {ECO:0000313|EMBL:ELJ67065.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_5_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25801..26142)
DNA (342bp) protein (114aa)
Inner membrane protein yiaB n=373 Tax=Escherichia RepID=E2QGS5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR05190.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_5_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26311..27765)
DNA (1455bp) protein (485aa)
xylB; Xylulose kinase (EC:2.7.1.17)
Xylulokinase n=46 Tax=Escherichia coli RepID=D2NCG4_ECOS5 rbh
XylB protein; Xylulose kinase {ECO:0000313|EMBL:CDN84320.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_10_1_scaffold_5_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27836..29158)
DNA (1323bp) protein (441aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=868140 species="Bacteria; Proteob
Xylose isomerase n=678 Tax=Enterobacteriaceae RepID=XYLA_ECO27 rbh
NECEvent2014_10_1_scaffold_5_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29524..30516
DNA (993bp) protein (331aa)
D-xylose-binding periplasmic protein n=728 Tax=Enterobacteriaceae RepID=E2QGS8_ECOLX rbh
xylF; D-xylose transporter subunit XylF
D-xylose-binding periplasmic protein {ECO:0000313|EMBL:EQP45315.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_10_1_scaffold_5_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30594..32135
DNA (1542bp) protein (514aa)
Xylose import ATP-binding protein XylG n=210 Tax=Escherichia RepID=XYLG_ECOL5 rbh
xylG; D-xylose transport ATP-binding protein XylG
Xylose transporter {ECO:0000313|EMBL:AJO85627.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_5_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32113..33294
DNA (1182bp) protein (394aa)
Xylose transport system permease protein XylH n=1077 Tax=Enterobacteriaceae RepID=XYLH_ECO57 rbh
xylH; Xylose ABC transporter, membrane component XylH
Inner-membrane translocator {ECO:0000313|EMBL:ADX48822.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
Displaying items 1-30 of 222 in total

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