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NECEvent2014_10_1_scaffold_8

Alias: Felix_001_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_8_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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155..1135
DNA (981bp) protein (327aa)
Vitamin B12 import system permease protein BtuC n=37 Tax=Escherichia RepID=D2NIY8_ECOS5 rbh
btuC; Vitamin B12 ABC transporter permease
Vitamin B12 import system permease protein BtuC {ECO:0000256|SAAS:SAAS00165801}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_10_1_scaffold_8_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1198..1749
DNA (552bp) protein (184aa)
Glutathione peroxidase n=464 Tax=Enterobacteriaceae RepID=J7R532_ECOLX rbh
btuE; putative glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_8_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1749..2498
DNA (750bp) protein (250aa)
Vitamin B12 import ATP-binding protein BtuD {ECO:0000256|HAMAP-Rule:MF_01005}; EC=3.6.3.33 {ECO:0000256|HAMAP-Rule:MF_01005};; Vitamin B12-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01005}; TaxID=
Vitamin B12 import ATP-binding protein BtuD n=44 Tax=Escherichia coli RepID=D2NIY6_ECOS5 rbh
btuD; Vitamin B12 transporter ATPase
NECEvent2014_10_1_scaffold_8_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2576..3040
DNA (465bp) protein (155aa)
Lipoprotein nlpC n=286 Tax=Enterobacteriaceae RepID=E2QMR9_ECOLX rbh
lipoprotein
NlpC (ORF-17) {ECO:0000313|EMBL:EGI50627.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
NECEvent2014_10_1_scaffold_8_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3288..4001
DNA (714bp) protein (238aa)
Uncharacterized protein n=53 Tax=Escherichia RepID=D2NIY4_ECOS5 rbh
ydiV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL47302.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_8_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4064..5500
DNA (1437bp) protein (479aa)
UPF0061 protein YdiU n=36 Tax=Escherichia coli RepID=D2NIY3_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO83640.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
NECEvent2014_10_1_scaffold_8_7
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5504..5695)
DNA (192bp) protein (64aa)
Conserved protein, hemin uptake protein HemP-like protein n=31 Tax=Enterobacteriaceae RepID=G4Q0Q4_ECOLX
ydiE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ30181.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 9
NECEvent2014_10_1_scaffold_8_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6873)
DNA (1047bp) protein (349aa)
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive n=625 Tax=Enterobacteriaceae RepID=AROH_ECOL6 rbh
NECEvent2014_10_1_scaffold_8_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7030..7863)
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein n=1208 Tax=Enterobacteriaceae RepID=PSRP_ECO24 rbh
hypothetical protein
Phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062
NECEvent2014_10_1_scaffold_8_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8196..10574
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AJO83635.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AJO83635.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Phosphoenolpyruvate synthase n=39 Tax=Escherichia coli RepID=D2NIX8_ECOS5 rbh
phosphoenolpyruvate synthase
NECEvent2014_10_1_scaffold_8_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10631..12277)
DNA (1647bp) protein (549aa)
Short-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KEJ58839.1}; EC=6.2.1.- {ECO:0000313|EMBL:KEJ58839.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
Short chain acyl-CoA synthetase, anaerobic n=250 Tax=Escherichia RepID=A1ABN8_ECOK1 rbh
ydiD; short chain acyl-CoA synthetase
NECEvent2014_10_1_scaffold_8_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12334..12627)
DNA (294bp) protein (98aa)
Ferredoxin-like protein n=35 Tax=Escherichia coli RepID=G0DD69_ECOLX
putative ferredoxin
Ferredoxin {ECO:0000313|EMBL:AJO83634.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_8_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12624..13913)
DNA (1290bp) protein (430aa)
Oxidoreductase with FAD/NAD(P)-binding domain-containing protein n=36 Tax=Escherichia coli RepID=L2ZMN2_ECOLX rbh
putative flavoprotein FixC
Probable electron transfer flavoprotein-quinone oxidoreductase YdiS {ECO:0000313|EMBL:CDN82202.1}; YdiS protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NECEvent2014_10_1_scaffold_8_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13968..14906)
DNA (939bp) protein (313aa)
Electron transfer flavoprotein, FAD-binding n=36 Tax=Escherichia coli RepID=L2ZKS4_ECOLX rbh
putative flavoprotein FixB
Electron transfer flavoprotein {ECO:0000313|EMBL:AJO83632.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_10_1_scaffold_8_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14926..15690)
DNA (765bp) protein (255aa)
Electron transfer flavoprotein FixB n=123 Tax=Escherichia RepID=V8KVD6_ECOLX rbh
putative flavoprotein FixA
Putative flavoprotein subunit required for anaerobic carnitine metabolism {ECO:0000313|EMBL:EHU46167.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
NECEvent2014_10_1_scaffold_8_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16006..16917
DNA (912bp) protein (304aa)
Uncharacterized HTH-type transcriptional regulator n=403 Tax=Enterobacteriaceae RepID=E2QMQ7_ECOLX rbh
transcriptional regulator YdiP
Uncharacterized protein {ECO:0000313|EMBL:KDG95942.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_8_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16960..18111)
DNA (1152bp) protein (384aa)
Probable acyl-CoA dehydrogenase YdiO n=1151 Tax=Enterobacteriaceae RepID=YDIO_ECO57 rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EHU40553.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_10_1_scaffold_8_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18125..19720)
DNA (1596bp) protein (532aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Acetate CoA-transferase YdiF n=112 Tax=Escherichia RepID=D2NIX0_ECOS5 rbh
hypothetical protein
NECEvent2014_10_1_scaffold_8_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19867..20625)
DNA (759bp) protein (253aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214,
3-dehydroquinate dehydratase n=246 Tax=Enterobacteriaceae RepID=AROD_ECOBW rbh
3-dehydroquinate dehydratase
NECEvent2014_10_1_scaffold_8_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20656..21522)
DNA (867bp) protein (289aa)
ydiB; shikimate/quinate 5-dehydrogenase (EC:1.1.1.282)
Shikimate dehydrogenase {ECO:0000313|EMBL:AJO83625.1}; EC=1.1.1.282 {ECO:0000313|EMBL:AJO83625.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Quinate/shikimate dehydrogenase n=27 Tax=Escherichia coli RepID=G0DD61_ECOLX rbh
NECEvent2014_10_1_scaffold_8_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21534..22799)
DNA (1266bp) protein (422aa)
Inner membrane transport protein ydiN n=382 Tax=Escherichia RepID=E2QMQ2_ECOLX rbh
transporter
Inner membrane transport protein ydiN {ECO:0000313|EMBL:EZJ41395.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_8_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23026..24240)
DNA (1215bp) protein (405aa)
Inner membrane transport protein ydiM n=330 Tax=Escherichia RepID=E2QMQ1_ECOLX rbh
ydiM; major facilitator family transporter
Inner membrane transport protein YdiM {ECO:0000313|EMBL:EGI16100.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_10_1_scaffold_8_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24340..24696)
DNA (357bp) protein (119aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NIW5_ECOS5
ydiL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ58827.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_8_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25125..26237)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=273 Tax=Escherichia coli RepID=B7MVG4_ECO81 rbh
ydiK; putative inner membrane protein
Inner membrane protein {ECO:0000313|EMBL:EQQ12230.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_8_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26451..29507
DNA (3057bp) protein (1019aa)
FAD linked oxidase, C-terminal domain protein n=40 Tax=Escherichia coli RepID=E6AKX0_ECOLX rbh
ydiJ; Putative oxidase
Uncharacterized protein {ECO:0000313|EMBL:CDN82189.1}; YdiJ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_8_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29504..29914
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioest
Esterase YdiI n=27 Tax=Escherichia coli RepID=L2ZLK2_ECOLX
acyl-CoA esterase
NECEvent2014_10_1_scaffold_8_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30014..30202
DNA (189bp) protein (63aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D7XNJ2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:END91983.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_8_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30751..31119
DNA (369bp) protein (123aa)
Fe-S cluster assembly protein n=309 Tax=Escherichia RepID=A1ABM2_ECOK1
sufA; iron-sulfur cluster assembly scaffold protein
Fe-S cluster assembly protein {ECO:0000313|EMBL:CAS09317.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_10_1_scaffold_8_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31128..32615
DNA (1488bp) protein (496aa)
Cysteine desulfurase activator complex subunit n=27 Tax=Escherichia coli RepID=G0DCF0_ECOLX rbh
ynhE; cysteine desulfurase activator complex subunit
Component of SufB-SufC-SufD cysteine desulfurase (SufS) activator complex {ECO:0000313|EMBL:CDN82185.1}; SufB protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
NECEvent2014_10_1_scaffold_8_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32625..33371
DNA (747bp) protein (249aa)
Component of SufBCD complex, ATP-binding component of ABC superfamily n=267 Tax=Escherichia RepID=B7MVF8_ECO81 rbh
sufC; cysteine desulfurase
Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:CDL42263.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Displaying items 1-30 of 174 in total

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