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NECEvent2014_10_1_scaffold_11

Alias: Felix_001_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_11_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..554)
DNA (459bp) protein (153aa)
Inner membrane transport protein YhaO n=3 Tax=Escherichia coli RepID=M8KMV7_ECOLX
serine transporter
Serine transporter family protein {ECO:0000313|EMBL:EHW13081.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_10_1_scaffold_11_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(832..2196)
DNA (1365bp) protein (455aa)
tdcG; L-serine dehydratase 3 (EC:4.3.1.17)
L-serine dehydratase n=175 Tax=Escherichia RepID=A1AG24_ECOK1 rbh
L-serine ammonia-lyase {ECO:0000313|EMBL:EGI14802.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_10_1_scaffold_11_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2268..2657)
DNA (390bp) protein (130aa)
TdcF protein n=4 Tax=Escherichia coli RepID=D3QS56_ECOCB
hypothetical protein
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ESD77848.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_10_1_scaffold_11_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2671..4965)
DNA (2295bp) protein (765aa)
2-ketobutyrate formate-lyase / Pyruvate formate-lyase {ECO:0000313|EMBL:CDL42406.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDL42406.1};; EC=2.3.1.54 {ECO:0000313|EMBL:CDL42406.1};; TaxID=1432559 species="Bacte
2-ketobutyrate formate-lyase / Pyruvate formate-lyase n=35 Tax=Escherichia coli RepID=G0DCR8_ECOLX rbh
putative formate acetyltransferase 3
NECEvent2014_10_1_scaffold_11_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4999..6207)
DNA (1209bp) protein (403aa)
tdcD; Propionate kinase / Acetate kinase (EC:2.7.2.15 2.7.2.1)
Propionate kinase {ECO:0000256|HAMAP-Rule:MF_01881}; EC=2.7.2.15 {ECO:0000256|HAMAP-Rule:MF_01881};; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
Propionate kinase n=64 Tax=Escherichia RepID=D2NMX1_ECOS5 rbh
NECEvent2014_10_1_scaffold_11_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..7564)
DNA (1332bp) protein (444aa)
Threonine/serine transporter TdcC n=659 Tax=Enterobacteriaceae RepID=TDCC_ECO27 rbh
tdcC; threonine/serine transporter TdcC
Threonine/serine transporter TdcC {ECO:0000256|HAMAP-Rule:MF_01583}; H(+)/threonine-serine symporter {ECO:0000256|HAMAP-Rule:MF_01583}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacte
NECEvent2014_10_1_scaffold_11_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7586..8575)
DNA (990bp) protein (330aa)
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFK20446.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFK20446.1};; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
L-threonine dehydratase catabolic TdcB n=1302 Tax=Enterobacteriaceae RepID=TDCB_ECO57 rbh
NECEvent2014_10_1_scaffold_11_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8674..9612)
DNA (939bp) protein (313aa)
Transcriptional activator n=43 Tax=Escherichia RepID=D2NMX4_ECOS5 rbh
transcriptional regulator
Transcriptional activator {ECO:0000313|EMBL:BAI56498.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_11_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..12265)
DNA (1146bp) protein (382aa)
Glycerate kinase 2 n=261 Tax=Escherichia RepID=E2QEG2_ECOLX rbh
hypothetical protein
Glycerate kinase 2 {ECO:0000313|EMBL:EOW94176.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli K
NECEvent2014_10_1_scaffold_11_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12362..13252)
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AJO86690.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AJO86690.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
2-hydroxy-3-oxopropionate reductase n=2 Tax=Escherichia coli RepID=T7RFX1_ECOLX rbh
NECEvent2014_10_1_scaffold_11_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13282..14052)
DNA (771bp) protein (257aa)
garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000
5-keto-4-deoxy-D-glucarate aldolase n=804 Tax=Enterobacteriaceae RepID=GARL_ECO24 rbh
NECEvent2014_10_1_scaffold_11_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14068..15402)
DNA (1335bp) protein (445aa)
Galactarate permease GarP n=163 Tax=Escherichia RepID=B1LFM8_ECOSM rbh
garP; galactarate transporter
Galactonate transporter {ECO:0000313|EMBL:EYV13832.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_11_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15777..17348
DNA (1572bp) protein (524aa)
Galactarate dehydratase {ECO:0000313|EMBL:ENA38055.1}; EC=4.2.1.42 {ECO:0000313|EMBL:ENA38055.1};; TaxID=1116068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
galactarate dehydratase (EC:4.2.1.42)
(D)-galactarate dehydrogenase n=85 Tax=Enterobacteriaceae RepID=C6EH98_ECOBD rbh
NECEvent2014_10_1_scaffold_11_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17497..17832
DNA (336bp) protein (112aa)
Antitoxin PrlF n=254 Tax=Escherichia RepID=PRLF_ECOL6
sohA; regulator PrlF
Antitoxin PrlF {ECO:0000313|EMBL:ELJ68152.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85
NECEvent2014_10_1_scaffold_11_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17832..18296
DNA (465bp) protein (155aa)
Uncharacterized protein n=194 Tax=Escherichia RepID=J7R9C0_ECOLX rbh
hypothetical protein
Toxin YhaV {ECO:0000313|EMBL:EOW19236.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
NECEvent2014_10_1_scaffold_11_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18351..19160)
DNA (810bp) protein (270aa)
Putative aga operon transcriptional repressor n=1001 Tax=Enterobacteriaceae RepID=AGAR_ECO57 rbh
agaR; DNA-binding transcriptional regulator AgaR
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EIG80807.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_11_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19409..20689
DNA (1281bp) protein (427aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=47 Tax=Escherichia RepID=D2NMY4_ECOS5 rbh
putative tagatose 6-phosphate kinase
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_10_1_scaffold_11_18
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20712..21185
DNA (474bp) protein (158aa)
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS rbh
agaV; acetylgalactosamine-specific PTS system enzyme IIB component
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigel
NECEvent2014_10_1_scaffold_11_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21196..21975
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX rbh
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
Uncharacterized protein {ECO:0000313|EMBL:EHP65746.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_11_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21965..22843
DNA (879bp) protein (293aa)
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS rbh
PTS system hexose/hexosamine family transporter permease IID
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:BAI56511.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_10_1_scaffold_11_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22861..23295
DNA (435bp) protein (145aa)
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
agaF; PTS system mannose/sorbose-specific transporter subunit IIA
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_10_1_scaffold_11_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23292..24425
DNA (1134bp) protein (378aa)
agaA; N-acetylgalactosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1432559 species
N-acetylglucosamine-6-phosphate deacetylase n=36 Tax=Escherichia coli RepID=D2NMY9_ECOS5 rbh
NECEvent2014_10_1_scaffold_11_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24775..25929
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate isomerase n=50 Tax=Escherichia coli RepID=G0D0N1_ECOLX rbh
agaS; Tagatose-6-phosphate isomerase
AgaS protein; Putative tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:CDN83886.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_10_1_scaffold_11_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25942..26802
DNA (861bp) protein (287aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=36 Tax=Escherichia coli RepID=D2NMZ1_ECOS5 rbh
kbaY; tagatose-bisphosphate aldolase
NECEvent2014_10_1_scaffold_11_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26969..27445
DNA (477bp) protein (159aa)
PTS system N-acetylgalactosamine-specific IIB component n=53 Tax=Escherichia RepID=D2NMZ2_ECOS5 rbh
PTS system N-acetylgalactosamine-specific IIB component
PTS system N-acetylgalactosamine-specific IIB component {ECO:0000313|EMBL:BAI56516.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_10_1_scaffold_11_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27484..28287
DNA (804bp) protein (268aa)
agaC; N-acetylgalactosamine-specific enzyme IIC component of PTS (EC:2.7.1.69)
N-acetylgalactosamine permease IIC component 1 n=625 Tax=Enterobacteriaceae RepID=PTPC1_ECOLI rbh
N-acetylgalactosamine-specific PTS system transporter subunit IIC {ECO:0000313|EMBL:EFF11780.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
NECEvent2014_10_1_scaffold_11_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28277..29068
DNA (792bp) protein (264aa)
agaD; Galactosamine-specific IID component of PTS system (EC:2.7.1.69) rbh
Galactosamine-specific IID component of PTS system n=18 Tax=Escherichia coli RepID=G0D0N5_ECOLX rbh
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:AJO85217.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_10_1_scaffold_11_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29123..29836
DNA (714bp) protein (238aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Glucosamine-6-phosphate deaminase n=25 Tax=Escherichia coli RepID=L2ZFM0_ECOLX rbh
putative galactosamine-6-phosphate isomerase
NECEvent2014_10_1_scaffold_11_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29886..30749)
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=123 Tax=Escherichia coli RepID=E2QEI2_ECOLX rbh
16S rRNA methyltransferase
NECEvent2014_10_1_scaffold_11_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30814..32850
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=40 Tax=Escherichia coli RepID=D2NMZ7_ECOS5 rbh
penicillin-binding protein activator LpoA
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=431946 species="Bacteria; Proteobacte
Displaying items 1-30 of 152 in total

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