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NECEvent2014_10_1_scaffold_15

Alias: Felix_001_scaffold_15

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Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_15_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73..177)
DNA (105bp) protein (35aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=L2ZSQ6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO82969.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
NECEvent2014_10_1_scaffold_15_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..1541)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NGK2_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54471.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_15_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2127..4550
DNA (2424bp) protein (808aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NGK1_ECOS5 rbh
pgaA; outer membrane protein
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:AJO82967.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_10_1_scaffold_15_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4559..6577
DNA (2019bp) protein (673aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NGK0_ECOS5 rbh
hypothetical protein rbh
Outer membrane N-deacetylase {ECO:0000313|EMBL:AJO82966.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_15_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6570..7895
DNA (1326bp) protein (442aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NGJ9_ECOS5 rbh
N-glycosyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:BAI54468.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_15_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..8310
DNA (414bp) protein (138aa)
Uncharacterized protein n=40 Tax=Escherichia RepID=D2NGJ8_ECOS5
pgaD; permease
Uncharacterized protein {ECO:0000313|EMBL:BAI54467.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_15_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8360..9424)
DNA (1065bp) protein (355aa)
PhoB-dependent ATP-binding pho regulon component n=38 Tax=Escherichia coli RepID=D2NGJ7_ECOS5 rbh
nucleoside triphosphate hydrolase
Protein PhoH (Phosphate starvation-inducible protein psiH) {ECO:0000313|EMBL:EGI17159.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_10_1_scaffold_15_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9775..11046)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=D2NGJ6_ECOS5 rbh
peroxidase
Uncharacterized protein {ECO:0000313|EMBL:CDN81479.1}; YcdB protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_15_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11052..12179)
DNA (1128bp) protein (376aa)
UPF0409 protein ycdO n=66 Tax=Escherichia RepID=E2QJQ9_ECOLX rbh
hypothetical protein
Ferrous iron transporter {ECO:0000313|EMBL:AJO82962.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_10_1_scaffold_15_10
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12237..13067)
DNA (831bp) protein (277aa)
Ferrous iron permease EfeU (Ferrous iron uptake protein) n=45 Tax=Escherichia RepID=F4SX97_ECOLX rbh
iron permease
Putative cytochrome {ECO:0000313|EMBL:CDC76448.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" so
NECEvent2014_10_1_scaffold_15_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13287..14795)
DNA (1509bp) protein (503aa)
Proline transport protein n=50 Tax=Escherichia RepID=D2NGJ3_ECOS5 rbh
proline:sodium symporter
PutP protein; Sodium/proline symporter {ECO:0000313|EMBL:CDN81476.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_10_1_scaffold_15_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14954..15163)
DNA (210bp) protein (70aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D2NGJ2_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54461.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_15_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15218..19180
DNA (3963bp) protein (1321aa)
proline dehydrogenase (EC:1.5.1.12)
Proline dehydrogenase n=36 Tax=Escherichia coli RepID=D2NGJ1_ECOS5 rbh
Proline dehydrogenase {ECO:0000313|EMBL:BAI54460.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_10_1_scaffold_15_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19220..19858)
DNA (639bp) protein (213aa)
Putative transcriptional regulator YcdC n=2 Tax=Escherichia coli RepID=G7RCG0_ECOC2 rbh
rutR; Transcriptional regulator RutR
RutR protein {ECO:0000313|EMBL:CEP59001.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
NECEvent2014_10_1_scaffold_15_15
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20146..21237
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1263075 species="
Pyrimidine monooxygenase RutA n=43 Tax=Escherichia RepID=RUTA_ECOS5 rbh
pyrimidine monooxygenase
NECEvent2014_10_1_scaffold_15_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21234..21929
DNA (696bp) protein (232aa)
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023142}; EC=3.5.1.110 {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023120};
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=1 Tax=Escherichia coli CAG:4 RepID=R6TSN5_9ESCH rbh
ycdL; Isochorismatase family protein
NECEvent2014_10_1_scaffold_15_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21941..22327
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1444
Putative aminoacrylate peracid reductase RutC n=10 Tax=Escherichia coli RepID=T7XDS3_ECOLX
rutC; pyrimidine utilization protein C
NECEvent2014_10_1_scaffold_15_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22335..23135
DNA (801bp) protein (267aa)
Putative aminoacrylate hydrolase RutD n=40 Tax=Escherichia coli RepID=RUTD_ECOS5 rbh
putative hydrolase
Aminoacrylate hydrolase {ECO:0000313|EMBL:AJO82955.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
NECEvent2014_10_1_scaffold_15_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23145..23735
DNA (591bp) protein (197aa)
Probable malonic semialdehyde reductase RutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
Malonic semialdehyde reductase n=36 Tax=Escherichia coli RepID=V8KR37_ECOLX rbh
rutE; hypothetical protein
NECEvent2014_10_1_scaffold_15_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23746..24240
DNA (495bp) protein (165aa)
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HA
FMN reductase (NADH) RutF n=44 Tax=Escherichia RepID=RUTF_ECOS5 rbh
hypothetical protein
NECEvent2014_10_1_scaffold_15_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24261..25589
DNA (1329bp) protein (443aa)
Pyrimidine utilization transport protein G n=1 Tax=Escherichia coli CAG:4 RepID=R6U2X7_9ESCH rbh
ycdG; Putative purine permease
Uracil permease {ECO:0000313|EMBL:CDL43122.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC4
NECEvent2014_10_1_scaffold_15_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25672..25845)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI22367.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_15_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26218..26814
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H dehydrogenase (quinone) n=1031 Tax=Enterobacteriaceae RepID=NQOR_ECO24 rbh
wrbA; NAD(P)H:quinone oxidoreductase
NECEvent2014_10_1_scaffold_15_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26835..27062
DNA (228bp) protein (76aa)
Uncharacterized protein YccJ n=1422 Tax=Enterobacteriaceae RepID=YCCJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20823.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_15_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27100..28341)
DNA (1242bp) protein (414aa)
Glucose-1-phosphatase {ECO:0000313|EMBL:KEJ61572.1}; EC=3.1.3.10 {ECO:0000313|EMBL:KEJ61572.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
Glucose-1-phosphatase n=35 Tax=Escherichia coli RepID=D2NGH9_ECOS5 rbh
glucose-1-phosphatase/inositol phosphatase
NECEvent2014_10_1_scaffold_15_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28876..29796
DNA (921bp) protein (307aa)
Curved DNA-binding protein n=368 Tax=Bacteria RepID=CBPA_ECO27 rbh
cbpA; curved DNA-binding protein CbpA
Curved DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_01154, ECO:0000256|SAAS:SAAS00010094}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_10_1_scaffold_15_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29796..30101
DNA (306bp) protein (102aa)
Chaperone modulatory protein CbpM n=368 Tax=Escherichia RepID=CBPM_ECO45
cbpM; chaperone-modulator protein CbpM
Chaperone modulatory protein CbpM {ECO:0000256|HAMAP-Rule:MF_01155}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_15_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30356..30955)
DNA (600bp) protein (200aa)
Chaperone protein TorD n=40 Tax=Escherichia coli RepID=D2NGH6_ECOS5 rbh
torD; Chaperone protein
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
NECEvent2014_10_1_scaffold_15_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30952..33498)
DNA (2547bp) protein (849aa)
Trimethylamine-N-oxide reductase TorA {ECO:0000313|EMBL:KEJ61568.1}; EC=1.7.2.3 {ECO:0000313|EMBL:KEJ61568.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Trimethylamine N-oxide reductase subunit n=47 Tax=Escherichia RepID=D2NGH5_ECOS5 rbh
trimethylamine N-oxide reductase subunit
NECEvent2014_10_1_scaffold_15_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33498..34670)
DNA (1173bp) protein (391aa)
Cytochrome c-type protein torC n=343 Tax=Enterobacteriaceae RepID=E2QJN9_ECOLX rbh
cytochrome c-type protein
Trimethylamine-N-oxide reductase c-type cytochrome TorC {ECO:0000313|EMBL:EHU55375.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
Displaying items 1-30 of 135 in total

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