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NECEvent2014_10_1_scaffold_17

Alias: Felix_001_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_17_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..358)
DNA (357bp) protein (119aa)
type IV secretion protein Rhs
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN83426.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
NECEvent2014_10_1_scaffold_17_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..3006)
DNA (2637bp) protein (879aa)
Clp ATPase n=36 Tax=Escherichia coli RepID=G0DAM6_ECOLX rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:KEJ56266.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
Clp ATPase
NECEvent2014_10_1_scaffold_17_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3197..3688)
DNA (492bp) protein (164aa)
Secreted protein Hcp n=239 Tax=Escherichia RepID=E2QQR5_ECOLX rbh
hypothetical protein
Hcp1 family type VI secretion system effector {ECO:0000313|EMBL:EOW96068.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_10_1_scaffold_17_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3746..5398)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NLX5_ECOS5 rbh
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Inner membrane lipoprotein YiaD {ECO:0000313|EMBL:CDN83423.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacter
NECEvent2014_10_1_scaffold_17_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5411..6076)
DNA (666bp) protein (222aa)
Uncharacterized protein n=41 Tax=Escherichia coli RepID=D2NLX4_ECOS5 rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGI14435.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_17_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6073..7410)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=41 Tax=Escherichia coli RepID=D2NLX3_ECOS5 rbh
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN83421.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
NECEvent2014_10_1_scaffold_17_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7428..8966)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=41 Tax=Escherichia coli RepID=D2NLX2_ECOS5 rbh
hypothetical protein
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EGI14433.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_10_1_scaffold_17_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9525)
DNA (501bp) protein (167aa)
Uncharacterized protein n=53 Tax=Escherichia RepID=D2NLX1_ECOS5 rbh
hypothetical protein
FaoA {ECO:0000313|EMBL:AHW84627.1}; FtoA {ECO:0000313|EMBL:AHW84716.1}; Type VI secretion protein {ECO:0000313|EMBL:AJO84792.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
NECEvent2014_10_1_scaffold_17_trna_5
unknown

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comp(10164..10237)
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_17_trna_4
unknown

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comp(10274..10347)
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_17_trna_3
unknown

Not on your lists

comp(10384..10457)
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_17_9
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10666..11763
DNA (1098bp) protein (366aa)
mltA; murein transglycosylase A (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase A n=296 Tax=Escherichia RepID=E2QQQ9_ECOLX rbh
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CDC82536.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia;
NECEvent2014_10_1_scaffold_17_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11840..12646
DNA (807bp) protein (269aa)
Uncharacterized protein ygdL n=216 Tax=Escherichia RepID=E2QQQ8_ECOLX rbh
ygdL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56143.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_17_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12697..13140)
DNA (444bp) protein (148aa)
Uncharacterized protein n=331 Tax=Escherichia RepID=D2NLW8_ECOS5
ygdK; Fe-S metabolism protein (sufE-like)
Cysteine desulfurase, sulfur acceptor subunit CsdE {ECO:0000313|EMBL:ELE53791.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
NECEvent2014_10_1_scaffold_17_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13140..14345)
DNA (1206bp) protein (402aa)
Cysteine desulfurase, catalytic subunit CsdA {ECO:0000313|EMBL:KEJ56255.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KEJ56255.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
Uncharacterized protein n=49 Tax=Escherichia coli RepID=D2NLW7_ECOS5 rbh
hypothetical protein
NECEvent2014_10_1_scaffold_17_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14537..14764
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_17_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15115..16032
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator protein n=27 Tax=Escherichia coli RepID=G0DAL3_ECOLX rbh
gcvA; Glycine cleavage system transcriptional activator protein
Transcriptional regulator {ECO:0000313|EMBL:AJO84786.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_10_1_scaffold_17_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16051..16446
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
NECEvent2014_10_1_scaffold_17_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16439..17539
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rR
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24 rbh
ygdE; putative RNA 2'-O-ribose methyltransferase
NECEvent2014_10_1_scaffold_17_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17583..18314)
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI rbh
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EZD33730.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_17_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18372..18794)
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAM
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
NECEvent2014_10_1_scaffold_17_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18796..20214)
DNA (1419bp) protein (473aa)
fucK; L-fuculokinase (EC:2.7.1.51)
L-fuculokinase n=31 Tax=Escherichia coli RepID=G0DAK8_ECOLX rbh
L-fuculose kinase {ECO:0000313|EMBL:AJO84781.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_17_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20323..22098)
DNA (1776bp) protein (592aa)
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SA
L-fucose isomerase n=178 Tax=Escherichia RepID=FUCI_ECO45 rbh
NECEvent2014_10_1_scaffold_17_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22131..23447)
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=283 Tax=Escherichia RepID=E2QQP7_ECOLX rbh
fucP; L-fucose transporter
L-fucose:H+ symporter permease {ECO:0000313|EMBL:ACB19059.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_10_1_scaffold_17_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23994..24641
DNA (648bp) protein (216aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=1181728 specie
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6 rbh
NECEvent2014_10_1_scaffold_17_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24669..25817
DNA (1149bp) protein (383aa)
Lactaldehyde reductase {ECO:0000313|EMBL:KEJ56243.1}; EC=1.1.1.77 {ECO:0000313|EMBL:KEJ56243.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
Lactaldehyde reductase n=30 Tax=Escherichia coli RepID=G0DAK3_ECOLX rbh
L-1,2-propanediol oxidoreductase
NECEvent2014_10_1_scaffold_17_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25922..26767)
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS
Flap endonuclease Xni n=243 Tax=Escherichia RepID=D5CZ75_ECOKI rbh
xni; exonuclease IX
NECEvent2014_10_1_scaffold_17_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26789..28156)
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EII24605.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EII24605.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX rbh
sdaB; L-serine deaminase II
NECEvent2014_10_1_scaffold_17_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28214..29503)
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX rbh
sdaC; Serine transporter
Serine transporter {ECO:0000313|EMBL:CDL48225.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli I
NECEvent2014_10_1_scaffold_17_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30060..31424)
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57 rbh
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Displaying items 1-30 of 132 in total

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