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NECEvent2014_10_1_scaffold_87

Alias: Felix_001_scaffold_87

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_87_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151..786)
DNA (636bp) protein (212aa)
Sulfoxide reductase heme-binding subunit YedZ n=35 Tax=Escherichia coli RepID=G0D169_ECOLX rbh
yedZ; hypothetical protein
Sulfite oxidase subunit YedZ {ECO:0000313|EMBL:AJO83952.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_87_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(787..1791)
DNA (1005bp) protein (335aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precur
Sulfoxide reductase catalytic subunit YedY n=105 Tax=Enterobacteriaceae RepID=YEDY_ECO7I rbh
yedY; membrane-anchored, periplasmic TMAO, DMSO reductase
NECEvent2014_10_1_scaffold_87_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..2313)
DNA (414bp) protein (138aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=490 Tax=Enterobacteriaceae RepID=E2QNG1_ECOLX
Transthyretin-like protein
NECEvent2014_10_1_scaffold_87_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2335..3117
DNA (783bp) protein (261aa)
Two-component system response regulator n=2 Tax=Escherichia coli RepID=T6I2V2_ECOLX rbh
transcriptional regulatory protein YedW
Transcriptional activator protein CopR {ECO:0000313|EMBL:EGI15424.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_87_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3117..4475
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Heavy metal sensor kinase n=40 Tax=Escherichia coli RepID=L2ZLL6_ECOLX rbh
sensor histidine kinase
NECEvent2014_10_1_scaffold_87_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4583..5434)
DNA (852bp) protein (284aa)
Molecular chaperone Hsp31 and glyoxalase 3 {ECO:0000256|HAMAP-Rule:MF_01046}; EC=4.2.1.130 {ECO:0000256|HAMAP-Rule:MF_01046};; Glyoxalase III {ECO:0000256|HAMAP-Rule:MF_01046}; Holdase {ECO:0000256|HA
Molecular chaperone Hsp31 and glyoxalase 3 n=300 Tax=Escherichia RepID=HCHA_ECO7I rbh
yedU; chaperone protein HchA
NECEvent2014_10_1_scaffold_87_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6027..7142)
DNA (1116bp) protein (372aa)
Outer membrane protein n=31 Tax=Escherichia coli RepID=G0D163_ECOLX rbh
outer membrane protein rbh
Outer membrane porin protein ompD {ECO:0000313|EMBL:KEJ58550.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_10_1_scaffold_87_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7400..7510
DNA (111bp) protein (37aa)
Uncharacterized protein n=55 Tax=Escherichia coli RepID=L2YFX8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU91196.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_87_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8113..8808
DNA (696bp) protein (232aa)
HD domain protein n=42 Tax=Escherichia coli RepID=D8AF05_ECOLX rbh
hypothetical protein rbh
Phosphohydrolase {ECO:0000313|EMBL:EQX71093.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UME
NECEvent2014_10_1_scaffold_87_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8875..10293
DNA (1419bp) protein (473aa)
dcm; DNA-cytosine methylase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
Cytosine-specific methyltransferase n=102 Tax=Escherichia coli RepID=E2QNF4_ECOLX rbh
NECEvent2014_10_1_scaffold_87_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10274..10744
DNA (471bp) protein (157aa)
DNA mismatch endonuclease, patch repair protein n=207 Tax=Escherichia RepID=A1ACA7_ECOK1 rbh
vsr; DNA mismatch endonuclease of very short patch repair
Short patch repair protein {ECO:0000313|EMBL:EOU76646.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_10_1_scaffold_87_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11653)
DNA (921bp) protein (307aa)
Uncharacterized inner membrane transporter YedA n=744 Tax=Enterobacteriaceae RepID=YEDA_ECO57 rbh
hypothetical protein
Carboxylate/Amino Acid/Amine Transporter family protein {ECO:0000313|EMBL:EHU46345.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_10_1_scaffold_87_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11826..12743
DNA (918bp) protein (306aa)
Uncharacterized protein n=307 Tax=Enterobacteriaceae RepID=B7MCL3_ECO45 rbh
yedI; hypothetical protein
Inner membrane protein yedI {ECO:0000313|EMBL:EOV98149.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_87_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12822..13004
DNA (183bp) protein (61aa)
Uncharacterized protein YodC n=799 Tax=Enterobacteriaceae RepID=YODC_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX27338.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_87_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13175..14869
DNA (1695bp) protein (565aa)
Cellulose synthesis regulatory protein n=33 Tax=Escherichia coli RepID=L2ZLK5_ECOLX rbh
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN82515.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
diguanylate cyclase
NECEvent2014_10_1_scaffold_87_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14866..15681)
DNA (816bp) protein (272aa)
yedP; Mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70)
Putative mannosyl-3-phosphoglycerate phosphatase {ECO:0000256|HAMAP-Rule:MF_00617}; Short=MPGP {ECO:0000256|HAMAP-Rule:MF_00617};; EC=3.1.3.70 {ECO:0000256|HAMAP-Rule:MF_00617};; TaxID=1444220 species
Mannosyl-3-phosphoglycerate phosphatase n=33 Tax=Escherichia coli RepID=U5SLI1_ECOLX rbh
NECEvent2014_10_1_scaffold_87_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15977..16204)
DNA (228bp) protein (76aa)
Uncharacterized protein YodD n=1372 Tax=Enterobacteriaceae RepID=YODD_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ40955.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_87_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16367..16555
DNA (189bp) protein (63aa)
Protein DsrB n=3 Tax=Escherichia coli RepID=E9XIP5_ECOLX
dsrB; DsrB protein
Protein DsrB {ECO:0000256|HAMAP-Rule:MF_01549, ECO:0000256|SAAS:SAAS00024808}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_10_1_scaffold_87_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16599..17222)
DNA (624bp) protein (208aa)
Colanic acid capsular biosynthesis activation protein n=35 Tax=Escherichia coli RepID=G0D277_ECOLX rbh
rcsA; Colanic acid capsular biosynthesis activation protein
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:AJO83935.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_10_1_scaffold_87_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17512..18297)
DNA (786bp) protein (262aa)
Flagellar biosynthetic protein fliR n=256 Tax=Escherichia RepID=E2QNE4_ECOLX rbh
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_10_1_scaffold_87_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18306..18575)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1346 Tax=Enterobacteriaceae RepID=FLIQ_ECO57
fliQ; Flagellar biosynthesis protein
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EHU46305.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_87_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18585..19322)
DNA (738bp) protein (246aa)
Flagellar biosynthetic protein fliP n=303 Tax=Enterobacteriaceae RepID=E2QNE2_ECOLX rbh
fliP; flagellar biosynthesis protein FliP
Flagellar biosynthetic protein fliP {ECO:0000313|EMBL:EQP55383.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_10_1_scaffold_87_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19322..19687)
DNA (366bp) protein (122aa)
Flagellar protein FliO n=58 Tax=Escherichia RepID=D2NJL5_ECOS5
flagellar biosynthesis protein FliO
Flagellar assembly protein FliO {ECO:0000313|EMBL:CDN82507.1}; FliO protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_10_1_scaffold_87_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19690..20103)
DNA (414bp) protein (138aa)
Flagellar motor switch protein FliN n=48 Tax=Escherichia RepID=D2NJL4_ECOS5
fliN1; Flagellar motor switch protein
Flagellar motor switch protein FliN {ECO:0000313|EMBL:BAI55338.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_87_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20100..21104)
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1239 Tax=Gammaproteobacteria RepID=C3T4T7_ECOLX rbh
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_10_1_scaffold_87_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21109..21573)
DNA (465bp) protein (155aa)
Flagellar protein FliL n=1009 Tax=Enterobacteriaceae RepID=FLIL_ECO57 rbh
flagellar basal body-associated protein FliL
Flagellar protein FliL {ECO:0000313|EMBL:EOV61684.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_87_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21678..22805)
DNA (1128bp) protein (376aa)
Flagellar hook-length control protein n=34 Tax=Escherichia RepID=G0D269_ECOLX rbh
fliK; Flagellar hook-length control protein
Flagellar hook-length control protein {ECO:0000313|EMBL:AJO83927.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_10_1_scaffold_87_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22802..23245)
DNA (444bp) protein (148aa)
Flagellar fliJ protein n=1137 Tax=Enterobacteriaceae RepID=C3T4V2_ECOLX
flagellar export protein FliJ
Flagellar FliJ protein {ECO:0000256|PIRNR:PIRNR019404}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_87_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23264..24637)
DNA (1374bp) protein (458aa)
ATP synthase {ECO:0000313|EMBL:AJO83925.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AJO83925.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
Flagellum-specific ATP synthase n=33 Tax=Escherichia coli RepID=G0D267_ECOLX rbh
fliI1; Flagellum-specific ATP synthase
NECEvent2014_10_1_scaffold_87_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24637..25323)
DNA (687bp) protein (229aa)
Flagellar assembly protein FliH n=77 Tax=Enterobacteriaceae RepID=D2AIC5_SHIF2 rbh
fliH; flagellar assembly protein H rbh
Flagellar assembly protein FliH,flagellar assembly protein H,type III secretion apparatus protein, HrpE/YscL family,Flagellar assembly protein FliH {ECO:0000313|EMBL:CDX07351.1}; TaxID=623 species="Ba
Displaying items 1-30 of 38 in total

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