ggKbase home page

NECEvent2014_10_1_scaffold_91

Alias: Felix_001_scaffold_91

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_91_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

410..1999
DNA (1590bp) protein (530aa)
purH; IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamideformyltransferase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=34 Tax=Escherichia coli RepID=D2NEP2_ECOS5 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
NECEvent2014_10_1_scaffold_91_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2011..3300
DNA (1290bp) protein (430aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CDN84843.1}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide
Phosphoribosylamine--glycine ligase n=38 Tax=Escherichia coli RepID=D2NEP1_ECOS5 rbh
NECEvent2014_10_1_scaffold_91_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..4622)
DNA (1326bp) protein (442aa)
Two-component regulator n=36 Tax=Escherichia coli RepID=D2NEP0_ECOS5 rbh
two-component regulator
Two-component regulator {ECO:0000313|EMBL:BAI57398.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_91_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4619..5995)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Two-component sensor kinase n=37 Tax=Escherichia coli RepID=D2NEN9_ECOS5 rbh
hydH; Sensor protein ZraS
NECEvent2014_10_1_scaffold_91_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6233..6652
DNA (420bp) protein (140aa)
Zinc resistance-associated protein n=2 Tax=Escherichia coli RepID=B2N326_ECOLX
zraP; zinc resistance protein
Zinc resistance-associated protein {ECO:0000313|EMBL:CDL43780.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_91_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6654..7289)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Escherichia coli O150:H5 (strain SE15) RepID=D2NEN7_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57395.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_91_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7362..7634)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=1444 Tax=Enterobacteriaceae RepID=DBHA_ECO57
transcriptional regulator HU subunit alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:EFJ84259.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_91_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7821..8411)
DNA (591bp) protein (197aa)
Uncharacterized protein n=45 Tax=Escherichia coli RepID=D2NEN5_ECOS5 rbh
yjaG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO86093.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
NECEvent2014_10_1_scaffold_91_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8454..9125)
DNA (672bp) protein (224aa)
endonuclease VIII (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=36 Tax=Escherichia coli RepID=D2NEN4_ECOS5 rbh
NECEvent2014_10_1_scaffold_91_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9135..10199)
DNA (1065bp) protein (355aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=273 Tax=Escherichia RepID=DCUP_ECO27 rbh
NECEvent2014_10_1_scaffold_91_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10239..11012)
DNA (774bp) protein (258aa)
nudC; NADH pyrophosphatase (EC:3.6.1.22)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1444220 species="Bacteria; P
NADH pyrophosphatase n=110 Tax=Escherichia RepID=NUDC_ECO7I rbh
NECEvent2014_10_1_scaffold_91_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11107..11583
DNA (477bp) protein (159aa)
Regulator of sigma D n=203 Tax=Escherichia RepID=RSD_ECO45 rbh
rsd; Regulator of sigma D
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche
NECEvent2014_10_1_scaffold_91_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11816..13711
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=55 Tax=Escherichia RepID=D2NEN0_ECOS5 rbh
5'-phosphoryl-5-aminoimidazole ThiC
NECEvent2014_10_1_scaffold_91_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13711..14346
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=39 Tax=Escherichia coli RepID=D2NEM9_ECOS5 rbh
thiamine-phosphate pyrophosphorylase ThiE
NECEvent2014_10_1_scaffold_91_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14339..15094
DNA (756bp) protein (252aa)
Thiamine biosynthesis adenylyltransferase ThiF n=37 Tax=Escherichia coli RepID=D2NEM8_ECOS5 rbh
thiamine biosynthesis adenylyltransferase ThiF
Thiamine biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:BAI57386.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_10_1_scaffold_91_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15278
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=37 Tax=Escherichia coli RepID=D2NEM7_ECOS5
sulfur carrier protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AJO86085.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_10_1_scaffold_91_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..16050
DNA (771bp) protein (257aa)
Thiazole synthase n=36 Tax=Escherichia coli RepID=D2NEM6_ECOS5 rbh
thiamin biosynthesis protein ThiG
Thiazole synthase {ECO:0000313|EMBL:AJO86084.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_91_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16047..17180
DNA (1134bp) protein (378aa)
Thiamin biosynthesis protein ThiH n=48 Tax=Escherichia coli RepID=D2NEM5_ECOS5 rbh
thiH; Thiazole biosynthesis protein ThiH
2-iminoacetate synthase {ECO:0000313|EMBL:CDN84827.1}; Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ente
NECEvent2014_10_1_scaffold_91_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17422..21645)
DNA (4224bp) protein (1408aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=280 Tax=Escherichia RepID=RPOC_ECOK1 rbh
NECEvent2014_10_1_scaffold_91_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21722..25750)
DNA (4029bp) protein (1343aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1301 Tax=Enterobacteriaceae RepID=RPOB_ECO24 rbh
NECEvent2014_10_1_scaffold_91_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26070..26435)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1424 Tax=Enterobacteriaceae RepID=RL7_ECO24
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_10_1_scaffold_91_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26502..26999)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1406 Tax=Enterobacteriaceae RepID=RL10_ECO24 rbh
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_10_1_scaffold_91_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27291..27995)
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=66 Tax=Escherichia RepID=D2NEM0_ECOS5 rbh
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_10_1_scaffold_91_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27999..28427)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1981 Tax=Enterobacteriaceae RepID=RL11_ECO24
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_10_1_scaffold_91_25
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28586..29131)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1120 Tax=Bacteria RepID=NUSG_ECOL6 rbh
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1302616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
NECEvent2014_10_1_scaffold_91_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29133..29516)
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1377 Tax=Enterobacteriaceae RepID=SECE_ECO57
secE; preprotein translocase subunit secE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_10_1_scaffold_91_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29746..29862)
DNA (117bp) protein (39aa)
Elongation protein Tu domain-containing protein n=1 Tax=Escherichia coli E1167 RepID=E9WAM7_ECOLX
translation elongation factor Tu
Elongation factor Tu 2 {ECO:0000313|EMBL:EMV15541.1}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Displaying 27 items

View Taxonomy