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NECEvent2014_10_1_scaffold_5_84

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(96434..97285)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core biosynthesis protein n=32 Tax=Escherichia coli RepID=I7AU32_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 283.0
  • Bit_score: 568
  • Evalue 3.30e-159
  • rbh
lipopolysaccharide core biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 283.0
  • Bit_score: 568
  • Evalue 9.40e-160
  • rbh
Lipopolysaccharide core biosynthesis protein {ECO:0000313|EMBL:CDN84381.1}; RfaZ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 283.0
  • Bit_score: 568
  • Evalue 4.70e-159

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAAGAATATTAGATATATTGACAAAAAAGATGTTGAAAACCTGATTGAAAATAAAACATCTGATGATGTTATTATTTTTCTTTCGGGCCCTACATCGCAAAAAACACCTTTGTCAGTATTACGAACAAAGGATATTATTGCTGTCAATGGTTCTGTGCAATATCTGTTAAGTCATAATATCGTTCCTTTTATATATGTACTTACAGATGTCCGCTTTTTACATCAGCGTCGTGATGATTTTTATAAATTTAGCCAGAGAAGCCGTTATACCATAGTAAACGTTGACGTTTATGAACATGCTTCCAAAGAAGATAAACTTTATATCCTCCAGAACTGCCTCGTATTACGGTCCTTTTATCGCCGGGAAAAAGGTGGTTTTATAAAGAAGATTAAATTTAATATATTGAGTCAGATTCACAAAGAACTGCTGATCTCTGTACCGTTGTCTAAAAAAGGTCGTCTGGTTGGATTTTGCAAGGACATTAGTTTTGGTTATTGTTCATGCCATACTATTGCCTTTGCTGCAATTCAAATAGCATATTCACTTAAGTATGCACGGATTATTTGTTCTGGTCTTGATTTAACGGGTAACTGCTCTCGTTTCTATGACGAAAATAATAATCCCATGCCCTCGGAATTGAGTAAGGATTTATTCAAAATCTTGCCATTTTTCCGTTTTATGCGTGATAATGTAGAAGATATTAATATCTATAATTTATCAGATGATACAGCTATTTCTTACGATGTAATTCCATTTATTAAATTTCAAGATATCAGTAGAGAAGAATCAAAAGATAAGACAAGAAAAAAAATGCAATATAGAACTTCAACTGATTCTTATGCTAATTAA
PROTEIN sequence
Length: 284
MKNIRYIDKKDVENLIENKTSDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSVQYLLSHNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILSQIHKELLISVPLSKKGRLVGFCKDISFGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGNCSRFYDENNNPMPSELSKDLFKILPFFRFMRDNVEDINIYNLSDDTAISYDVIPFIKFQDISREESKDKTRKKMQYRTSTDSYAN*