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NECEvent2014_10_1_scaffold_15_98

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(112270..112554)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1416 Tax=Enterobacteriaceae RepID=IHFB_ECO24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 192
  • Evalue 2.20e-46
ihfB; integration host factor (IHF), DNA-binding protein, beta subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 192
  • Evalue 6.10e-47
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1444081 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 192
  • Evalue 3.00e-46

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAACCAGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAA
PROTEIN sequence
Length: 95
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG*