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NECEvent2014_10_1_scaffold_25_17

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 12260..12913

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 443
  • Evalue 1.70e-121
Pseudouridine synthase n=37 Tax=Escherichia coli RepID=D2NHF1_ECOS5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 443
  • Evalue 1.20e-121
  • rbh
23S rRNA pseudouridine synthase E similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 443
  • Evalue 3.50e-122

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGGCAATTCATAATCTCTGAAAATACCATGCAAAAAACTTCTTTTAGAAATCACCAGGTTAAGCGATTCAGCTCGCAACGTTCTACCAGGCGTAAACCTGACAACCAGCCCACGCGTGTGATCCTGTTCAATAAACCCTACGATGTTCTTCCGCAGTTCACCGATGAAGCCGGACGCAAAACATTAAAAGAATTCATCCCGGTTCAGGGGGTGTATGCGGCAGGTCGTCTCGACCGCGACAGCGAAGGGTTACTGGTGCTGACCAATAACGGCGCGTTGCAGGCGCGTTTAACCCAGCCGGGTAAACGCACCGGAAAAATCTATTATGTGCAGGTGGAAGGTATTCCCACACAAGACGCACTTGAAGCCTTGCGCAATGGCGTAACCTTAAATGATGGCCCTACCCTGCCCGCAGGCGCGGAGCTGGTTGAAGAACCCGCGTGGTTATGGCCGCGGAATCCACCAATTCGTGAGCGCAAAAGTATTCCCACCAGCTGGCTGAAGATCACCTTATATGAAGGACGTAATCGCCAGGTGCGCCGCATGACCGCCCATGTTGGTTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGGGATTACTCTTTGGATAATCTTGCCAATGGCGAATGGCGAGACGCGACAGATTAA
PROTEIN sequence
Length: 218
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPDNQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVEEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWRDATD*