ggKbase home page

NECEvent2014_10_1_scaffold_25

Alias: Felix_001_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_25_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1473)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T7Y9E8_ECOLX
hypothetical protein
AlkA N-terminal domain protein {ECO:0000313|EMBL:KEJ62858.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_10_1_scaffold_25_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1723..2424)
DNA (702bp) protein (234aa)
Phage DNA replication protein P n=20 Tax=Escherichia coli RepID=G0D6X0_ECOLX rbh
Replication protein 14 rbh
Replication P family protein {ECO:0000313|EMBL:KEJ62857.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_10_1_scaffold_25_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2421..3425)
DNA (1005bp) protein (335aa)
Replication protein O n=83 Tax=Escherichia RepID=G0D6W9_ECOLX rbh
Replication protein O
Phage replication protein O domain {ECO:0000313|EMBL:ELE58150.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_10_1_scaffold_25_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3437..3976)
DNA (540bp) protein (180aa)
Uncharacterized protein n=19 Tax=Escherichia coli RepID=L2ZS84_ECOLX rbh
regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ62855.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_25_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4046..4276)
DNA (231bp) protein (77aa)
Cro n=291 Tax=Escherichia RepID=B7LB93_ECO55
phage regulatory protein Cro
Uncharacterized protein {ECO:0000313|EMBL:EKJ14908.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_25_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4315..5070
DNA (756bp) protein (252aa)
Regulatory protein CI from bacteriophage origin n=276 Tax=Escherichia RepID=B7LB92_ECO55 rbh
Regulatory protein CI from bacteriophage origin rbh
26 kDa repressor protein (Regulatory protein CI) {ECO:0000313|EMBL:EGI47250.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_10_1_scaffold_25_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5666..5872
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V0Y1M3_ECOLX
prophage Kil protein
Uncharacterized protein {ECO:0000313|EMBL:EQP56839.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_25_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5948..6244
DNA (297bp) protein (99aa)
Host-nuclease inhibitor protein Gam n=43 Tax=Escherichia coli RepID=G0D6W4_ECOLX
Host-nuclease inhibitor protein Gam
Host-nuclease inhibitor protein Gam {ECO:0000313|EMBL:AJO83082.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_10_1_scaffold_25_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6250..7035
DNA (786bp) protein (262aa)
Bet protein (Recombination protein Bet) n=800 Tax=root RepID=E2QKM8_ECOLX rbh
Recombination protein bet from phage origin
Phage recombination protein Bet {ECO:0000313|EMBL:KDW34432.1}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_10_1_scaffold_25_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7032..7712
DNA (681bp) protein (227aa)
Exonuclease from phage origin n=196 Tax=root RepID=B7MJD3_ECO45 rbh
exonuclease from phage origin
Exonuclease {ECO:0000313|EMBL:ELE03789.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
NECEvent2014_10_1_scaffold_25_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7709..7891
DNA (183bp) protein (61aa)
Uncharacterized protein n=90 Tax=Escherichia RepID=B7MJD2_ECO45
hypothetical protein
Cruciferin {ECO:0000313|EMBL:AJO83079.1}; Phage protein {ECO:0000313|EMBL:CKI03343.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_10_1_scaffold_25_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8667..8993
DNA (327bp) protein (109aa)
Uncharacterized protein n=114 Tax=Escherichia RepID=T2MPQ9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR02481.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_25_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8977..9216
DNA (240bp) protein (80aa)
Uncharacterized protein n=116 Tax=Escherichia RepID=B7MJC7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ62844.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_25_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..9592
DNA (237bp) protein (79aa)
Excisionase n=383 Tax=root RepID=VXIS_BPP21
putative excisionase
Excisionase-like family protein {ECO:0000313|EMBL:EMV22661.1}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_10_1_scaffold_25_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9582..10724
DNA (1143bp) protein (381aa)
Integrase of prophageCP-933X(Intergra se) n=163 Tax=root RepID=E2QKM0_ECOLX rbh
phage integrase
Phage integrase family protein {ECO:0000313|EMBL:KEJ49690.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_10_1_scaffold_25_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10838..12088)
DNA (1251bp) protein (417aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
Isocitrate dehydrogenase [NADP] n=839 Tax=Enterobacteriaceae RepID=Q93R41_ECOLX rbh
icd; NADP-dependent isocitrate dehydrogenase
NECEvent2014_10_1_scaffold_25_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12260..12913
DNA (654bp) protein (218aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Pseudouridine synthase n=37 Tax=Escherichia coli RepID=D2NHF1_ECOS5 rbh
23S rRNA pseudouridine synthase E
NECEvent2014_10_1_scaffold_25_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12923..13384
DNA (462bp) protein (154aa)
Phosphatase NudJ n=1073 Tax=Enterobacteriaceae RepID=NUDJ_ECO24 rbh
Phosphatase nudJ
Phosphatase nudJ {ECO:0000313|EMBL:ELE56729.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE
NECEvent2014_10_1_scaffold_25_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13438..14544
DNA (1107bp) protein (369aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
tRNA-specific 2-thiouridylase MnmA n=178 Tax=Escherichia coli RepID=D2NHE9_ECOS5 rbh
NECEvent2014_10_1_scaffold_25_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14580..15221
DNA (642bp) protein (214aa)
High frequency lysogenization protein HflD n=375 Tax=Escherichia RepID=HFLD_ECO27 rbh
hypothetical protein
High frequency lysogenization protein HflD {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1268995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_10_1_scaffold_25_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15225..16595
DNA (1371bp) protein (457aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=39 Tax=Escherichia coli RepID=D2NHE7_ECOS5 rbh
adenylosuccinate lyase
NECEvent2014_10_1_scaffold_25_22
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16764..17435
DNA (672bp) protein (224aa)
Transcriptional regulatory protein PhoP n=924 Tax=Enterobacteriaceae RepID=PHOP_ECOL6 rbh
phoP; DNA-binding transcriptional regulator PhoP
Transcriptional regulatory protein phoP {ECO:0000313|EMBL:EIQ21284.1}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="S
NECEvent2014_10_1_scaffold_25_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17435..18895
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Sensor protein PhoQ n=591 Tax=Enterobacteriaceae RepID=PHOQ_ECOLI rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_10_1_scaffold_25_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18971..20092
DNA (1122bp) protein (374aa)
Uncharacterized protein n=755 Tax=Enterobacteriaceae RepID=J7Q735_ECOLX rbh
putative cytoplasmic protein
Cupin family protein {ECO:0000313|EMBL:EFR16735.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_10_1_scaffold_25_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20141..21367)
DNA (1227bp) protein (409aa)
pepT; peptidase T (EC:3.4.11.4)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
Peptidase T n=11 Tax=Enterobacteriaceae RepID=B1LI16_ECOSM rbh
NECEvent2014_10_1_scaffold_25_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21617..22753
DNA (1137bp) protein (379aa)
potA; spermidine/putrescine ABC transporter (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobac
Spermidine/putrescine import ATP-binding protein PotA n=933 Tax=Enterobacteriaceae RepID=POTA_ECO57 rbh
NECEvent2014_10_1_scaffold_25_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22737..23594
DNA (858bp) protein (286aa)
Spermidine/putrescine transport system permease potB n=14 Tax=Escherichia coli RepID=L3KKD8_ECOLX rbh
potB; putrescine/spermidine ABC transporter permease rbh
PotB protein; Spermidine-putrescine transport system permease {ECO:0000313|EMBL:CDN81583.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_10_1_scaffold_25_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23591..24385
DNA (795bp) protein (265aa)
Spermidine/putrescine transport system permease protein PotC n=1392 Tax=Enterobacteriaceae RepID=POTC_ECO57 rbh
potC; Spermidine Putrescine ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEO02779.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_10_1_scaffold_25_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24382..25428
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=303 Tax=Escherichia RepID=B1LI21_ECOSM rbh
potD; spermidine/putrescine ABC transporter substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
NECEvent2014_10_1_scaffold_25_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25486..25947
DNA (462bp) protein (154aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NHD8_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN81580.1}; YmfA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
Displaying items 1-30 of 118 in total

View Taxonomy