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NECEvent2014_10_1_scaffold_25_36

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(30585..31784)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein-releasing system transmembrane protein LolC n=1097 Tax=Bacteria RepID=LOLC_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 770
  • Evalue 8.10e-220
  • rbh
outer membrane-specific lipoprotein transporter subunit LolC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 770
  • Evalue 2.30e-220
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:ELI31724.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 770
  • Evalue 1.10e-219

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGTGGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCGGAAACGGCAGTCAAACTGGACGGCGTTAATCGCGTCGCACCTATTACTACCGGTGATGTGGTACTGCAAAGCGCGCGCAGCGTGGCGGTCGGGGTGATGCTGGGTATCGACCCGGCGCAAAAAGATCCACTAACGCCGTATCTGGTCAATGTGAAACAAACTGACCTCGAGCCGGGGAAATATAATGTCATCCTCGGTGAACAGCTTGCCTCACAGTTGGGCGTCAATCGCGGTGATCAAATCCGCGTGATGGTGCCATCTGCTAGCCAGTTCACGCCGATGGGGCGTATTCCAAGTCAGCGCCTGTTCAATGTGATTGGCACTTTCGCCGCCAACAGTGAAGTCGATGGCTATGAAATGCTGGTGAATATTGAGGATGCCTCGCGTCTGATGCGTTATCCGGCAGGCAATATTACCGGCTGGCGTTTGTGGCTGGATGAGCCGCTGAAAGTCGACTCATTAAGTCAGCAAAAACTGCCTGAAGGCAGCAAATGGCAGGACTGGCGTGACCGTAAAGGCGAGCTGTTCCAGGCCGTACGCATGGAAAAAAATATGATGGGCTTGCTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCGCTGGGACTGATGGTGATGGAGAAGCAGGGCGAAGTGGCCATTCTTCAGACTCAGGGGCTGACTCCGCGGCAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCACTGCTTGCCAGCCAGTTGAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTCGCTATCGAGCCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCCTGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAA
PROTEIN sequence
Length: 400
MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE*