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NECEvent2014_10_1_scaffold_61_22

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 14730..15368

Top 3 Functional Annotations

Value Algorithm Source
TrbC n=17 Tax=Bacteria RepID=D9Z591_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 422
  • Evalue 2.90e-115
  • rbh
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 422
  • Evalue 8.10e-116
  • rbh
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KEJ61754.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 422
  • Evalue 4.00e-115

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAACCGGAAAATATTTGCACTTTTTGCTCTGACAGCAGGGATGCATCTTGCTGTTCATGCTTCAGAAAATGTGAACACAACTGAAAACCGCCAGTTCCTGAAGCAGCAGGAAAATTTAAGCAGACAACTGCGAGAGAAACCTGACCATCAGCTGAAAGCCTGGGCGGAGAAACAGGTGCTGGAAAACCCCCTTCAGCGTTCAGATAACCATTTTCTGGATGAGCTGGTTCGTAAACAGCAGGCTTCGCAGGACGGGAAACCCCGGCAGGGTGCCCTGTATTTTGTGTCGTTTTCCATACCCGAAGAGGGGCTGAAAAGGATGCTGAGCGAAACCCGGCACTACGGTATTCCCGCCACGCTGCGGGGCATGGTGAACAACGACCTGAAGGCCACGGCTGACGCCGTGTTGTCCCTGGTGAAAGACGGCGCAACTGATGGTGTTCAGATCGACCCGACGCTGTTTTCACAGTACGGCATTCGCAGCGTTCCGGCCCTGGTGGTGTTCTGCAGCCAGGGGCACGACATCATCCGGGGAAATCTGCGCGTCAGGCAGGCGCTGGAGAAAGTGGCCGCCACGGGTGACTGCCGGCAGGTGGCTCATGATTTACTGGCAGGGAAAGGAGATTCCGGGAAATGA
PROTEIN sequence
Length: 213
MNRKIFALFALTAGMHLAVHASENVNTTENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLSETRHYGIPATLRGMVNNDLKATADAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGHDIIRGNLRVRQALEKVAATGDCRQVAHDLLAGKGDSGK*