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NECEvent2014_10_1_scaffold_61

Alias: Felix_001_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_61_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120..407
DNA (288bp) protein (96aa)
Uncharacterized protein n=21 Tax=Bacteria RepID=F4MD21_ECOLX
hypothetical protein
Putative fimbrial-like adhesin protein {ECO:0000313|EMBL:EZJ80050.1}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_10_1_scaffold_61_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

528..1349
DNA (822bp) protein (274aa)
YubP n=140 Tax=Bacteria RepID=C7S9N3_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ80051.1}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_10_1_scaffold_61_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2293)
DNA (648bp) protein (216aa)
Transglycosylase SLT domain-containing protein n=6 Tax=Escherichia coli RepID=E9Z0F0_ECOLX rbh
lytic transglycosylase rbh
X polypeptide {ECO:0000313|EMBL:ACQ42005.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_61_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2579..2962
DNA (384bp) protein (128aa)
Relaxosome protein TraM n=75 Tax=Enterobacteriaceae RepID=TRAM2_ECOLX
conjugal transfer protein TraM
Escherichia coli O25b:H4-ST131 str. EC958 plasmid pEC958, complete sequence; TraM {ECO:0000313|EMBL:CDN85382.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
NECEvent2014_10_1_scaffold_61_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3156..3842
DNA (687bp) protein (229aa)
TraJ n=9 Tax=Escherichia coli RepID=C7S9N6_ECOLX rbh
conjugal transfer protein TraJ
Co,jugation transfer regulator protein {ECO:0000313|EMBL:CAQ87480.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_61_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3936..4163
DNA (228bp) protein (76aa)
Relaxosome protein TraY n=118 Tax=Bacteria RepID=TRAY2_ECOLX
TraY protein
Conjugation transfer protein {ECO:0000313|EMBL:CAQ87479.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_61_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4197..4559
DNA (363bp) protein (121aa)
Pilin n=73 Tax=Bacteria RepID=PIL4_ECOLX
conjugal transfer protein TraA
Type IV conjugative transfer system pilin TraA {ECO:0000313|EMBL:EZJ80056.1}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_10_1_scaffold_61_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4561..4875
DNA (315bp) protein (105aa)
TraL n=293 Tax=root RepID=D9Z579_ECOLX
TraL {ECO:0000313|EMBL:ADL14029.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
traL; conjugal transfer pilus assembly protein TraL
NECEvent2014_10_1_scaffold_61_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4897..5463
DNA (567bp) protein (189aa)
Protein TraE n=19 Tax=Escherichia coli RepID=TRAE2_ECOLX rbh
conjugal transfer protein TraE rbh
Type IV conjugative transfer system protein TraE {ECO:0000313|EMBL:KDZ36170.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_10_1_scaffold_61_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..6178
DNA (729bp) protein (243aa)
TraK lipoprotein n=351 Tax=Bacteria RepID=TRAK1_ECOLI rbh
traK; conjugal transfer protein TraK
Type-F conjugative transfer system secretin TraK {ECO:0000313|EMBL:EQN14080.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_10_1_scaffold_61_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6178..7605
DNA (1428bp) protein (476aa)
TraB n=21 Tax=Escherichia coli RepID=D9Z582_ECOLX rbh
conjugal transfer protein TraB rbh
TraB {ECO:0000313|EMBL:ADL14032.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_61_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7595..8179
DNA (585bp) protein (195aa)
TraP n=28 Tax=Bacteria RepID=D9Z583_ECOLX rbh
conjugal transfer protein TraP rbh
TraP family protein {ECO:0000313|EMBL:KEO23541.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_10_1_scaffold_61_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8166..8486
DNA (321bp) protein (107aa)
TrbD n=28 Tax=Bacteria RepID=D9Z584_ECOLX
conjugal transfer protein TrbD
TrbD {ECO:0000313|EMBL:ADL14034.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_61_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8479..8730
DNA (252bp) protein (84aa)
TrbG n=51 Tax=Bacteria RepID=D9Z585_ECOLX
conjugal transfer protein TrbG
Putative dNA gyrase, subunit A {ECO:0000313|EMBL:KDY14933.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_10_1_scaffold_61_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8727..9242
DNA (516bp) protein (172aa)
Conjugal transfer protein TraV n=13 Tax=Escherichia coli RepID=C7S9P6_ECOLX rbh
conjugal transfer protein TraV rbh
Type IV conjugative transfer system protein TraV {ECO:0000313|EMBL:KEJ36219.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_10_1_scaffold_61_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..9695
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Escherichia coli 179100 RepID=N3ILJ1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW08102.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_10_1_scaffold_61_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9758..12385
DNA (2628bp) protein (876aa)
F pilus assembly protein TraC n=12 Tax=Escherichia coli RepID=H1ZXI2_ECOLX rbh
TraC {ECO:0000313|EMBL:ADL14161.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
conjugal transfer protein TraC rbh
NECEvent2014_10_1_scaffold_61_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12382..12768
DNA (387bp) protein (129aa)
TrbI n=193 Tax=Bacteria RepID=D9Z587_ECOLX
trbI; conjugal transfer protein TrbI
Type-F conjugative transfer system protein TrbI {ECO:0000313|EMBL:KDW71800.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_10_1_scaffold_61_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12765..13397
DNA (633bp) protein (211aa)
Conjugal transfer pilus assembly protein TraW n=1 Tax=Escherichia coli RepID=G3K1I9_ECOLX rbh
traW; conjugal transfer pilus assembly protein TraW
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:EOV10947.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
NECEvent2014_10_1_scaffold_61_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13394..14386
DNA (993bp) protein (331aa)
TraU n=220 Tax=Bacteria RepID=D9Z589_ECOLX rbh
traU; conjugal transfer protein TraU
TraU family protein {ECO:0000313|EMBL:KEN82198.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_10_1_scaffold_61_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14416..14721
DNA (306bp) protein (102aa)
YfdA n=12 Tax=Bacteria RepID=D9Z590_ECOLX
hypothetical protein
Putative yfdA {ECO:0000313|EMBL:KDZ36183.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-
NECEvent2014_10_1_scaffold_61_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14730..15368
DNA (639bp) protein (213aa)
TrbC n=17 Tax=Bacteria RepID=D9Z591_ECOLX rbh
conjugal transfer protein TrbC rbh
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KEJ61754.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
NECEvent2014_10_1_scaffold_61_23

Not on your lists

15365..17173
DNA (1809bp) protein (603aa)
TraN n=20 Tax=Bacteria RepID=D9Z592_ECOLX rbh
Conjugative transfer protein {ECO:0000313|EMBL:AFV47269.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer protein TraN rbh
NECEvent2014_10_1_scaffold_61_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17200..17457
DNA (258bp) protein (86aa)
TrbE n=14 Tax=Bacteria RepID=D9Z593_ECOLX
conjugal transfer protein TrbE
Conjugal transfer TrbE family protein {ECO:0000313|EMBL:KDZ36186.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_61_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17450..18193
DNA (744bp) protein (248aa)
Conjugal pilus assembly protein TraF n=135 Tax=Bacteria RepID=B8XWR7_ECOLX rbh
traF; conjugative transfer protein
Type-F conjugative transfer system pilin assembly protein TraF {ECO:0000313|EMBL:EHW08110.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
NECEvent2014_10_1_scaffold_61_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18209..18547
DNA (339bp) protein (113aa)
TrbA n=42 Tax=Bacteria RepID=D9Z594_ECOLX
trbA; conjugative transfer protein
Putative membrane protein {ECO:0000313|EMBL:KDW81029.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_10_1_scaffold_61_27

Not on your lists

18674..18958
DNA (285bp) protein (95aa)
TraQ n=8 Tax=Bacteria RepID=D9Z595_ECOLX
conjugal transfer protein TraQ
Conjugative transfer protein {ECO:0000313|EMBL:AFV47265.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NECEvent2014_10_1_scaffold_61_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18945..19490
DNA (546bp) protein (182aa)
TrbB n=13 Tax=Bacteria RepID=D9Z596_ECOLX rbh
conjugal transfer protein TrbB rbh
TrbB {ECO:0000313|EMBL:ADL14046.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
NECEvent2014_10_1_scaffold_61_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19480..19761
DNA (282bp) protein (94aa)
Conjugal transfer protein TrbJ n=13 Tax=Bacteria RepID=H1ZXS0_ECOLX
TrbJ {ECO:0000313|EMBL:ADL14047.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
conjugal transfer protein TrbJ
NECEvent2014_10_1_scaffold_61_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19742..20134
DNA (393bp) protein (131aa)
TrbF n=14 Tax=Bacteria RepID=D9Z598_ECOLX
conjugal transfer protein TrbF
Putative acetyltransferase {ECO:0000313|EMBL:KEJ63836.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
Displaying items 1-30 of 46 in total

View Taxonomy