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NECEvent2014_10_1_scaffold_23

Alias: Felix_001_scaffold_23

Search features with annotation key words

Displaying items 31-60 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_23_31
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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28709..29446
DNA (738bp) protein (246aa)
Transcriptional regulator n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1X4_LACCS rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:CBL50009.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_23_32
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29499..29771)
DNA (273bp) protein (91aa)
Uncharacterized protein n=5 Tax=Lactobacillus crispatus RepID=D0DIB3_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEX29197.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein
NECEvent2014_10_1_scaffold_23_33
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29853..30689)
DNA (837bp) protein (279aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1X2_LACCS rbh
oxidoreductase, aldo/keto reductase family
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:CBL50007.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_23_34
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30818..31549)
DNA (732bp) protein (244aa)
Uncharacterized protein (Fragment) n=1 Tax=Lactobacillus crispatus 214-1 RepID=D4FGZ8_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI63857.1}; TaxID=1226332 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus CIRM-B
NECEvent2014_10_1_scaffold_23_35
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31549..33147)
DNA (1599bp) protein (533aa)
ABC transporter ATPase and permease component n=1 Tax=Lactobacillus helveticus CIRM-BIA 104 RepID=U6FAK0_LACHE rbh
ABC transporter permease {ECO:0000313|EMBL:AKG66548.1}; TaxID=1587 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus (Lactoba
ABC transport protein ATP-binding permease component rbh
NECEvent2014_10_1_scaffold_23_36
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33229..34050)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus 214-1 RepID=D4FGZ5_9LACO rbh
Transcriptional regulator {ECO:0000313|EMBL:EST03088.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC
XRE family transcriptional regulator rbh
NECEvent2014_10_1_scaffold_23_37
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34139..34576)
DNA (438bp) protein (146aa)
Acetyltransferase n=10 Tax=Lactobacillus crispatus RepID=D5H1X1_LACCS
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CBL50006.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_23_38
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35121..35654)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAC6_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03097.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
zinc-dependent metallopeptidase
NECEvent2014_10_1_scaffold_23_39
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35638..36000)
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=C7Y7Q4_9LACO
Putative toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EEJ70086.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;"
helix-turn-helix domain protein
NECEvent2014_10_1_scaffold_23_40
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36025..36417)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EEP8_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EST03095.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_23_41
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36424..36831)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=C2KDB3_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEJ70088.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
hypothetical protein
NECEvent2014_10_1_scaffold_23_42
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36831..37454)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus MV-1A-US RepID=C7Y7Q7_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEJ70089.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
hypothetical protein
NECEvent2014_10_1_scaffold_23_43
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37674..39446)
DNA (1773bp) protein (591aa)
67 kDa myosin-cross-reactive antigen family protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1X0_LACCS rbh
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:CBL50005.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lact
mycA1; 67 kda myosin-cross-reactive antigen family protein rbh
NECEvent2014_10_1_scaffold_23_44
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39552..40064
DNA (513bp) protein (171aa)
Transcriptional regulator n=6 Tax=Lactobacillus crispatus RepID=D5H1W9_LACCS rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:CBL50004.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_23_45
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40107..41573)
DNA (1467bp) protein (489aa)
Permease of the major facilitator superfamily n=2 Tax=Lactobacillus crispatus RepID=D5H1W8_LACCS rbh
permease of the major facilitator superfamily rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CBL50003.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacil
NECEvent2014_10_1_scaffold_23_46
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41606..41917)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1W7_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL50002.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_23_trna_8
unknown

Not on your lists

comp(41644..41716)
DNA (73bp)
transferRNA
NECEvent2014_10_1_scaffold_23_trna_7
unknown

Not on your lists

comp(41724..41796)
DNA (73bp)
transferRNA
NECEvent2014_10_1_scaffold_23_trna_6
unknown

Not on your lists

comp(41803..41876)
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_23_trna_5
unknown

Not on your lists

comp(41884..41970)
DNA (87bp)
transferRNA
NECEvent2014_10_1_scaffold_23_47
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(42061..42561)
DNA (501bp) protein (167aa)
Acetyltransferase n=9 Tax=Lactobacillus crispatus RepID=D5H1W6_LACCS rbh
acetyltransferase rbh
Acetyltransferase {ECO:0000313|EMBL:EST03608.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
NECEvent2014_10_1_scaffold_23_48
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(42564..43913)
DNA (1350bp) protein (450aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEJ70825.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEJ70825.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacilla
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Lactobacillus crispatus RepID=C2KB95_9LACO rbh
rumA1; RNA methyltransferase
NECEvent2014_10_1_scaffold_23_49
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(43997..45031)
DNA (1035bp) protein (345aa)
Penicillin-binding protein n=8 Tax=Lactobacillus crispatus RepID=D5H1W4_LACCS rbh
pbp1; penicillin-binding protein
Beta-lactamase {ECO:0000313|EMBL:EFQ43326.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus CTV-05.;"
NECEvent2014_10_1_scaffold_23_50
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

45432..46805
DNA (1374bp) protein (458aa)
Na /H antiporter NhaC n=8 Tax=Lactobacillus crispatus RepID=D5H1W3_LACCS rbh
nhaC; Na+/H+ antiporter rbh
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EEX29187.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US.
NECEvent2014_10_1_scaffold_23_51
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

46890..47924
DNA (1035bp) protein (345aa)
Uncharacterized protein n=6 Tax=Lactobacillus crispatus RepID=D0DIA2_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEX29186.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein rbh
NECEvent2014_10_1_scaffold_23_52
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(47899..48300)
DNA (402bp) protein (134aa)
Conserved protein n=7 Tax=Lactobacillus crispatus RepID=D5H1W0_LACCS
Uncharacterized protein {ECO:0000313|EMBL:EKB68909.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB077-07
hypothetical protein
NECEvent2014_10_1_scaffold_23_53
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

48409..49119
DNA (711bp) protein (237aa)
Membrane protein n=7 Tax=Lactobacillus crispatus RepID=D5H1U6_LACCS rbh
hypothetical protein
Membrane protein {ECO:0000313|EMBL:CBL49981.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_23_54
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(49189..50109)
DNA (921bp) protein (307aa)
Diacylglycerol kinase n=3 Tax=Lactobacillus crispatus RepID=D5H1U5_LACCS rbh
dagK; diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:CBL49980.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST
NECEvent2014_10_1_scaffold_23_55
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(50134..51564)
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=4 Tax=Lactobacillus crispatus RepID=C2KB85_9LACO rbh
gatB; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit b
NECEvent2014_10_1_scaffold_23_56
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(51569..53008)
DNA (1440bp) protein (480aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=491076
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Lactobacillus crispatus JV-V01 RepID=C2KB84_9LACO rbh
gatA; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a
Displaying items 31-60 of 123 in total

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