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NECEvent2014_10_1_scaffold_23

Alias: Felix_001_scaffold_23

Search features with annotation key words

Displaying items 61-90 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_23_57
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(53008..53316)
DNA (309bp) protein (103aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=11 Tax=Lactobacillus crispatus RepID=D5H1U2_LACCS
gatC; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit c
NECEvent2014_10_1_scaffold_23_58
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(53328..54476)
DNA (1149bp) protein (383aa)
Sex pheromone biosynthesis protein n=10 Tax=Lactobacillus crispatus RepID=D5H1U1_LACCS rbh
sex pheromone biosynthesis protein rbh
CamS sex pheromone family protein {ECO:0000313|EMBL:EEX29179.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
NECEvent2014_10_1_scaffold_23_59
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(54489..56495)
DNA (2007bp) protein (669aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GBW0_9LACO rbh
ligA; DNA ligase
NECEvent2014_10_1_scaffold_23_60
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(56530..58776)
DNA (2247bp) protein (749aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
ATP-dependent DNA helicase PcrA n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1T9_LACCS rbh
pcrA; ATP-dependent DNA helicase pcra
NECEvent2014_10_1_scaffold_23_61
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(58862..59509)
DNA (648bp) protein (216aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EEJ70809.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EEJ70809.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales;
N-acetylmuramidase n=4 Tax=Lactobacillus crispatus RepID=D5H1T8_LACCS rbh
N-acetylmuramidase
NECEvent2014_10_1_scaffold_23_trna_4
unknown

Not on your lists

comp(59595..59679)
DNA (85bp)
transferRNA
NECEvent2014_10_1_scaffold_23_62
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(59756..60214)
DNA (459bp) protein (153aa)
Metallopeptidase, SprT family n=3 Tax=Lactobacillus crispatus RepID=C2KB78_9LACO rbh
Metallopeptidase, SprT family {ECO:0000313|EMBL:EEU18424.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 12
sprL; sprt-like protein rbh
NECEvent2014_10_1_scaffold_23_63
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(60274..60972)
DNA (699bp) protein (233aa)
Glycosyltransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EL46_9LACO rbh
Glycosyltransferase {ECO:0000313|EMBL:EST03593.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
glycosyltransferase rbh
NECEvent2014_10_1_scaffold_23_64
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(60975..62405)
DNA (1431bp) protein (477aa)
Capsular polysaccharide synthesis protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1T5_LACCS rbh
capsular polysaccharide synthesis protein rbh
Capsular polysaccharide synthesis protein {ECO:0000313|EMBL:CBL49970.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_23_65
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(62407..63561)
DNA (1155bp) protein (385aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=9 Tax=Lactobacillus crispatus RepID=C2KB75_9LACO rbh
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EEJ70805.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
teichoic acid biosynthesis protein
NECEvent2014_10_1_scaffold_23_66
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(63651..66320)
DNA (2670bp) protein (890aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XLR9_9LACO rbh
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EEU18428.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sour
cation-transporting p-type atpase rbh
NECEvent2014_10_1_scaffold_23_67
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(66507..67337)
DNA (831bp) protein (277aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=491076 species="
NH(3)-dependent NAD(+) synthetase n=9 Tax=Lactobacillus crispatus RepID=C2KB72_9LACO rbh
nadE; nh(3)-dependent nad( ) synthetase
NECEvent2014_10_1_scaffold_23_68
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(67334..68830)
DNA (1497bp) protein (499aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=491076 species="
Nicotinate phosphoribosyltransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EL42_9LACO rbh
pncB; nicotinate phosphoribosyltransferase
NECEvent2014_10_1_scaffold_23_69
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(68899..69990)
DNA (1092bp) protein (364aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1T0_LACCS rbh
glycosyl transferase, group 1 family protein rbh
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:CBL49965.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacill
NECEvent2014_10_1_scaffold_23_70
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(70001..70732)
DNA (732bp) protein (244aa)
UDP-N-acetyl-D-mannosamine transferase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1S9_LACCS rbh
tagA; UDP-N-acetyl-d-mannosamine transferase rbh
UDP-N-acetyl-D-mannosamine transferase {ECO:0000313|EMBL:CBL49964.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
NECEvent2014_10_1_scaffold_23_71
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

70859..71245
DNA (387bp) protein (129aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EFQ43405.1}; EC=2.7.7.39 {ECO:0000313|EMBL:EFQ43405.1};; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillac
Glycerol-3-phosphate cytidylyltransferase n=9 Tax=Lactobacillus crispatus RepID=D5H1S8_LACCS
tagD; glycerol-3-phosphate cytidylyltransferase
NECEvent2014_10_1_scaffold_23_72
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(71293..71982)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=7 Tax=Lactobacillus crispatus RepID=D5H1S7_LACCS rbh
gntR1; transcriptional regulator, gntr family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL49962.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
NECEvent2014_10_1_scaffold_23_73
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(72082..73197)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EL38_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03583.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_23_74
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(73308..74924)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=6 Tax=Lactobacillus crispatus RepID=C7Y7U1_9LACO rbh
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEU18437.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lac
oligopeptide ABC transporter, oligopeptide-binding protein
NECEvent2014_10_1_scaffold_23_trna_3
unknown

Not on your lists

comp(75107..75178)
DNA (72bp)
transferRNA
NECEvent2014_10_1_scaffold_23_75
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(75169..75474)
DNA (306bp) protein (102aa)
Putative hydrophobic protein n=3 Tax=Lactobacillus helveticus RepID=U6FA70_LACHE
Putative hydrophobic protein {ECO:0000313|EMBL:CDI62745.1}; TaxID=1226332 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus C
NECEvent2014_10_1_scaffold_23_trna_2
unknown

Not on your lists

comp(75213..75294)
DNA (82bp)
transferRNA
NECEvent2014_10_1_scaffold_23_76
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(75417..76784)
DNA (1368bp) protein (456aa)
NADH peroxidase {ECO:0000313|EMBL:EEU18438.1}; EC=1.11.1.1 {ECO:0000313|EMBL:EEU18438.1};; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sour
Pyridine nucleotide-disulfide oxidoreductase n=5 Tax=Bacteria RepID=C2KB63_9LACO rbh
npr; NADH peroxidase
NECEvent2014_10_1_scaffold_23_77
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(76990..77211)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Lactobacillus crispatus RepID=C2KB62_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEJ70845.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
NECEvent2014_10_1_scaffold_23_78
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(77235..77555)
DNA (321bp) protein (107aa)
Uncharacterized protein n=7 Tax=Lactobacillus crispatus RepID=C7XLT1_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEX29159.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein
NECEvent2014_10_1_scaffold_23_79
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(77708..79183)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=3 Tax=Lactobacillus crispatus RepID=C7Y7U5_9LACO rbh
Putative bacterial surface layer protein {ECO:0000313|EMBL:EEJ70843.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus c
slpX; s-layer protein rbh
NECEvent2014_10_1_scaffold_23_80
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(79512..80348)
DNA (837bp) protein (279aa)
Transcriptional regulator n=7 Tax=Lactobacillus crispatus RepID=D5H1R9_LACCS rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL49954.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_23_81
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

80498..81181
DNA (684bp) protein (228aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684, ECO:0000313|EMBL:CBL49953.1}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacill
Ribose-5-phosphate isomerase n=2 Tax=Lactobacillus crispatus RepID=D5H1R8_LACCS rbh
rpiA1; ribose-5-phosphate isomerase rbh
NECEvent2014_10_1_scaffold_23_82
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

81168..82157
DNA (990bp) protein (330aa)
Oxidoreductase family protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZV6_9LACO rbh
Oxidoreductase family protein {ECO:0000313|EMBL:EST03431.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus E
oxidoreductase family protein
NECEvent2014_10_1_scaffold_23_83
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(82212..83384)
DNA (1173bp) protein (391aa)
Aspartate aminotransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EFL4_9LACO rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EST03430.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-L
Aspartate aminotransferase
Displaying items 61-90 of 123 in total

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