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NECEvent2014_10_1_scaffold_23_59

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(54489..56495)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 668.0
  • Bit_score: 1316
  • Evalue 0.0
DNA ligase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GBW0_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 668.0
  • Bit_score: 1316
  • Evalue 0.0
  • rbh
ligA; DNA ligase similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 668.0
  • Bit_score: 1307
  • Evalue 0.0

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2007
ATGGCAGAAATTACTCTTGATGAAGCTAAAAAAGAAGCGGCTTCACTTAGAAAACAGCTTAATGAATGGGCTGAGGCCTATTACTCTAAGGACGCGCCTGAGGTTGAAGACAATGTTTACGACCAAAGCTACAACCGCTTGCTTGAATTAGAAAAAGAATTTCCAGAGATTGTGACACCCGACTCCATTACCCAAAGAGTTGGGGGACAGATTGATAGTGATTTTACCAAGGTAGAGCACCCGATTCCAATGCTGTCAATGGGGGACGTCTTTTCCAAAGCTGAACTGAAGGATTTTGATCAACGGATGCAAAAATTAGTTGGTCATCCAGTTGAATATAACGTGGAATTAAAGATCGATGGCTTATCACTATCGCTTGAATATGAAAATGGTAAGTTGGTTCGTGCCTCAACGCGGGGTAACGGTTATGTTGGTGAAGATGTAACAGCTAATGCTAAGTATATTAGTGATATTCTACAGACTTTGCCTGAACCGTTAACAACTGAAGTGCGCGGTGAATGTTACATGAGCAAGGAAGCCTTTGCCAAGTTGAATGCAGAAAGAGAAGAGCAAGGTCTAGCAGTTTTTGCTAATCCACGTAATGCTGCAGCGGGTTCTTTGCGTCAACTTGATCCTAAAGTTACCAAGAAGCGTCAACTTAGTACCTTTATTTATACTTGGGTTAATCCGCCTGAAGAAATTACTAGTCAGCACCAAGCAATTCAAAAAATGCATGATTTAGGCTTTCATACCAATGAAACCGGTCGTAAGTTAAAAACATTAGATGAAGTTTTTGCCTTTATCGATGAATACACAGCTAAACGAAACAGCCTAACATATGGTATTGATGGCATTGTGTTAAAAATTGATGATCTAGGAATTGAACAAGAGCTCGGCAACACTGTTAAGGTGCCTCGCTGGGAAATTGCTTATAAATTTCCACCTGAAGAACAAGAAACTGTAGTGCGGGATATCGTTTGGACTGTCGGCCGTACCGGAGTAGTTACTCCAACTGCGGTCATGGATCCGGTGCAACTAGCTGGTACAACTGTAGCTAGGGCTTCATTGCACAACCCAGATTATTTGAATGAAAAGGGCATCAGGATTGGTGATACCGTTAAACTGCATAAAGCAGGCGATATTATTCCAGAAATCTCTGAAGTCGTCATGGCTAAAAGACCGGCAGATTCTGTAGCTTATCAGATTCTAACGACTTGTCCATCCTGTGGGCAAAAATTAGTTCACCTAGAAGATGAAGTAGCTTTGCGCTGCATCAATCCATCTTGTCCAGCTCAAGTTGAGGAGGGCATTACGCACTTTGCTTCTCGACCGGCTATGAACATTGCCGGTTTGGGGCCAAAGATCGTTAAACAATTGATTGCTAAAGATTTAGTGCATAATGTGGCTGATCTTTATCACTTAACTGCAGATGATTTAGCACAACTCGATCATTTTAAGGAAAAATCGATCAATAATTTGTTAACTGCCTTAAACAATTCAAAGCAAAACTCAGTTGAATTATTGATTACTGGATTGGGAATTGACCATGTTGGGGCCAAAGCAGCACGCTTAATTGCTCAAAAGTTTAAAAATCTGGCAAAGATTATGTCTCTAGACGTGCAAGAAATAGCTTCTATCGATACAATAGGCATGACGATTGCGGAATCAATGACAACATATTTTGCTCAACCAGAAGCACAGAAGGTAATTGATGAGCTGCGTGAGAGCGGCCTGAATATGGATTACCTAGGTGCAGATGAGCCTGCAGAAATTGAAGATAATCCATTTAAGGATAAGACTGTAGTGCTAACAGGTAAATTAGAGCATTATACTAGAAGTGAGTTTACGAAAAAATTACAAGCTTTAGGTGCCAAAGTTACGGGTTCAGTTTCGCATAAGACCGATTACGTGATTTATGGCAAAGATGCTGGTTCTAAGTATACTAAAGCGCAGACTTTAGGTGTACCACTTTTGACTGAAGAAGAAGCAATTGCACAAATTGAATAA
PROTEIN sequence
Length: 669
MAEITLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPDSITQRVGGQIDSDFTKVEHPIPMLSMGDVFSKAELKDFDQRMQKLVGHPVEYNVELKIDGLSLSLEYENGKLVRASTRGNGYVGEDVTANAKYISDILQTLPEPLTTEVRGECYMSKEAFAKLNAEREEQGLAVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNPPEEITSQHQAIQKMHDLGFHTNETGRKLKTLDEVFAFIDEYTAKRNSLTYGIDGIVLKIDDLGIEQELGNTVKVPRWEIAYKFPPEEQETVVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHNPDYLNEKGIRIGDTVKLHKAGDIIPEISEVVMAKRPADSVAYQILTTCPSCGQKLVHLEDEVALRCINPSCPAQVEEGITHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTADDLAQLDHFKEKSINNLLTALNNSKQNSVELLITGLGIDHVGAKAARLIAQKFKNLAKIMSLDVQEIASIDTIGMTIAESMTTYFAQPEAQKVIDELRESGLNMDYLGADEPAEIEDNPFKDKTVVLTGKLEHYTRSEFTKKLQALGAKVTGSVSHKTDYVIYGKDAGSKYTKAQTLGVPLLTEEEAIAQIE*