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NECEvent2014_10_1_scaffold_55

Alias: Felix_001_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_55_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

255..1247
DNA (993bp) protein (331aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMA
Ferredoxin--NADP reductase n=2 Tax=Lactobacillus crispatus RepID=C7XLN0_9LACO rbh
trxB1; thioredoxin reductase rbh
NECEvent2014_10_1_scaffold_55_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1257..1907
DNA (651bp) protein (217aa)
DedA protein n=2 Tax=Lactobacillus crispatus RepID=D5H1J9_LACCS rbh
dedA; deda protein rbh
DedA protein {ECO:0000313|EMBL:CBL49884.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_55_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1919..2527)
DNA (609bp) protein (203aa)
Membrane protein n=9 Tax=Lactobacillus crispatus RepID=D5H1J8_LACCS rbh
hypothetical protein
TIGR01906 family protein {ECO:0000313|EMBL:EEX28655.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-U
NECEvent2014_10_1_scaffold_55_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2524..3294)
DNA (771bp) protein (257aa)
HAD hydrolase, TIGR01457 family n=6 Tax=Lactobacillus crispatus RepID=C2KCQ4_9LACO rbh
HAD hydrolase, TIGR01457 family {ECO:0000313|EMBL:EEJ70292.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
had superfamily hydrolase, subfamily iia
NECEvent2014_10_1_scaffold_55_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3294..3884)
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=C2KCQ5_9LACO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EST02776.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_55_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3877..5259)
DNA (1383bp) protein (461aa)
Ser/Thr phosphatase family protein n=2 Tax=Lactobacillus crispatus RepID=D4FE16_9LACO rbh
5'-nucleotidase/2',3'-cyclic phosphodiesterase {ECO:0000313|EMBL:EST02775.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobac
5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase rbh
NECEvent2014_10_1_scaffold_55_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5275..5595)
DNA (321bp) protein (107aa)
Uncharacterized protein n=11 Tax=Lactobacillus crispatus RepID=C2KCQ7_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL49879.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_55_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5709..7079
DNA (1371bp) protein (457aa)
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEJ70296.1}; EC=3.1.4.46 {ECO:0000313|EMBL:EEJ70296.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales;
Glycerophosphoryl diester phosphodiesterase n=7 Tax=Lactobacillus crispatus RepID=D5H1J3_LACCS rbh
glycerophosphoryl diester phosphodiesterase
NECEvent2014_10_1_scaffold_55_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7121..8122)
DNA (1002bp) protein (334aa)
Catabolite control protein A n=2 Tax=Lactobacillus crispatus RepID=D5H1J2_LACCS rbh
ccpA; catabolite control protein a rbh
Catabolite control protein a {ECO:0000313|EMBL:EST02772.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM
NECEvent2014_10_1_scaffold_55_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8273..9379
DNA (1107bp) protein (369aa)
Xaa-Pro dipeptidase n=3 Tax=Lactobacillus crispatus RepID=D0DJM1_9LACO rbh
Xaa-pro dipeptidase {ECO:0000313|EMBL:EST02771.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
pepQ; xaa-pro dipeptidase
NECEvent2014_10_1_scaffold_55_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9438..9806)
DNA (369bp) protein (123aa)
Conserved protein n=11 Tax=Lactobacillus crispatus RepID=D5H1J0_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EST02770.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_55_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9824..10249)
DNA (426bp) protein (142aa)
Methyl-accepting chemotaxis-like protein n=11 Tax=Lactobacillus crispatus RepID=D5H1I9_LACCS
methyl-accepting chemotaxis-like protein
Methyl-accepting chemotaxis-like protein {ECO:0000313|EMBL:CBL49874.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus c
NECEvent2014_10_1_scaffold_55_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10358..11194
DNA (837bp) protein (279aa)
Mechanosensitive ion channel n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EJ68_9LACO rbh
mechanosensitive ion channel rbh
Mechanosensitive ion channel {ECO:0000313|EMBL:EST02768.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM
NECEvent2014_10_1_scaffold_55_14
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11318..11581)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus amylovorus (strain GRL 1112) RepID=E4SLI4_LACAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ58442.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain
NECEvent2014_10_1_scaffold_55_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11597..12202)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1I7_LACCS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL49872.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_55_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12404..13372)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1I6_LACCS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL49871.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_55_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(13467..14087)
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EDP7_9LACO rbh
nucleoside-triphosphatase
NECEvent2014_10_1_scaffold_55_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14087..14893)
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=748671 species="Bacteria; Firmi
Glutamate racemase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1I4_LACCS rbh
murI; glutamate racemase
NECEvent2014_10_1_scaffold_55_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14969..15391
DNA (423bp) protein (141aa)
Uncharacterized protein n=8 Tax=Lactobacillus crispatus RepID=C2KCS3_9LACO
hydrocarbon binding protein, v4r domain
Uncharacterized protein {ECO:0000313|EMBL:EEJ70280.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
NECEvent2014_10_1_scaffold_55_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15480..15854
DNA (375bp) protein (125aa)
Large-conductance mechanosensitive channel n=9 Tax=Lactobacillus crispatus RepID=C2KCS4_9LACO
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lac
mscL; large-conductance mechanosensitive channel
NECEvent2014_10_1_scaffold_55_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15908..16219)
DNA (312bp) protein (104aa)
Thioredoxin n=9 Tax=Lactobacillus crispatus RepID=D5H1I1_LACCS
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBL49866.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_55_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16302..18659)
DNA (2358bp) protein (786aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=748671 species="Bacteria; Firmi
Endonuclease MutS2 n=3 Tax=Lactobacillus crispatus RepID=D5H1I0_LACCS rbh
mutS2; DNA mismatch repair protein muts2
NECEvent2014_10_1_scaffold_55_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18717..19028)
DNA (312bp) protein (104aa)
UPF0473 protein LCRIS_00417 n=11 Tax=Lactobacillus crispatus RepID=D5H1H9_LACCS
hypothetical protein
UPF0473 protein LCRIS_00417 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
NECEvent2014_10_1_scaffold_55_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19030..19458)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=575597 specie
Holliday junction resolvase n=11 Tax=Lactobacillus crispatus RepID=V5EJ59_9LACO
ruvX; holliday junction resolvase
NECEvent2014_10_1_scaffold_55_25
Lactobacillus ultunensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19458..19694)
DNA (237bp) protein (79aa)
UPF0297 protein LBA0418 n=23 Tax=Lactobacillus RepID=Y418_LACAC
hypothetical protein
UPF0297 protein HMPREF0548_2183 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=525365 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ultune
NECEvent2014_10_1_scaffold_55_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19776..22415)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1H6_LACCS rbh
alaS; alanyl-tRNA synthetase rbh
NECEvent2014_10_1_scaffold_55_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22658..24019)
DNA (1362bp) protein (454aa)
DEAD/DEAH box helicase n=6 Tax=Lactobacillus crispatus RepID=C2KCT1_9LACO rbh
Putative DEAD-box ATP-dependent RNA helicase CshB {ECO:0000313|EMBL:EEU18837.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactob
ATP-dependent RNA helicase
NECEvent2014_10_1_scaffold_55_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24012..24968)
DNA (957bp) protein (319aa)
Phosphoesterase, dhh family protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELL4_9LACO rbh
Phosphoesterase, dhh family protein {ECO:0000313|EMBL:EST02754.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
phosphoesterase, dhh family protein rbh
NECEvent2014_10_1_scaffold_55_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25032..26150)
DNA (1119bp) protein (373aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:CBL49858.1}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=748671 species="
DNA polymerase IV n=2 Tax=Lactobacillus crispatus RepID=D5H1H3_LACCS rbh
dinB; DNA polymerase iv rbh
NECEvent2014_10_1_scaffold_55_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26143..27627)
DNA (1485bp) protein (495aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=8 Tax=Lactobacillus crispatus RepID=C2KCT4_9LACO rbh
zwf; glucose-6-phosphate 1-dehydrogenase rbh
Displaying items 1-30 of 53 in total

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