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NECEvent2014_10_1_scaffold_85

Alias: Felix_001_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_85_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1..309
DNA (309bp) protein (103aa)
Putative transposase n=1 Tax=Lactobacillus amylovorus (strain GRL 1112) RepID=F2M3U0_LACAR
putative transposase
Uncharacterized protein {ECO:0000313|EMBL:EEU18296.1}; Flags: Fragment;; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_85_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

375..533
DNA (159bp) protein (53aa)
Putative transposase n=1 Tax=Lactobacillus amylovorus (strain GRL 1112) RepID=F2M3U0_LACAR
putative transposase
Transposase, IS4 family {ECO:0000313|EMBL:EEJ70336.1}; Flags: Fragment;; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_85_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(516..1100)
DNA (585bp) protein (195aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1C8_LACCS rbh
phoU; phosphate transport system regulatory protein phou
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
NECEvent2014_10_1_scaffold_85_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1118..1873)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATP-binding protein n=3 Tax=Lactobacillus crispatus RepID=D5H1C7_LACCS rbh
pstB2; phosphate ABC transporter, ATP-binding protein rbh
NECEvent2014_10_1_scaffold_85_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1875..2669)
DNA (795bp) protein (265aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATP-binding protein n=9 Tax=Lactobacillus crispatus RepID=D5H1C6_LACCS rbh
pstB1; phosphate ABC transporter, ATP-binding protein
NECEvent2014_10_1_scaffold_85_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2678..3565)
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein n=2 Tax=Lactobacillus crispatus RepID=D5H1C5_LACCS rbh
pstA; phosphate ABC transporter, permease protein rbh
Phosphate ABC transporter, permease protein {ECO:0000313|EMBL:EST03392.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacill
NECEvent2014_10_1_scaffold_85_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3567..4562)
DNA (996bp) protein (332aa)
Phosphate ABC transporter, permease protein n=2 Tax=Lactobacillus crispatus RepID=D5H1C4_LACCS rbh
pstC; phosphate ABC transporter, permease protein rbh
Phosphate ABC transporter, permease protein {ECO:0000313|EMBL:CBL49809.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
NECEvent2014_10_1_scaffold_85_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4566..5432)
DNA (867bp) protein (289aa)
Phosphate ABC transporter, phosphate-binding protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EFH8_9LACO rbh
Phosphate ABC transporter, phosphate-binding protein {ECO:0000313|EMBL:EST03390.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="La
pstS; phosphate ABC transporter, phosphate-binding protein rbh
NECEvent2014_10_1_scaffold_85_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(5552..6244)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=10 Tax=Lactobacillus crispatus RepID=D5H1C2_LACCS rbh
rplA; 50S ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-
NECEvent2014_10_1_scaffold_85_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6322..6747)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=8 Tax=Lactobacillus RepID=D5H1C1_LACCS
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
rplK; 50S ribosomal protein L11
NECEvent2014_10_1_scaffold_85_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6878..7435)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=4 Tax=Lactobacillus crispatus RepID=C2KH69_9LACO rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobaci
nusG; transcription antitermination protein nusg
NECEvent2014_10_1_scaffold_85_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7544..7714)
DNA (171bp) protein (57aa)
Protein translocase subunit SecE n=11 Tax=Lactobacillus crispatus RepID=D5H1B9_LACCS
secE; preprotein translocase, sece subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
NECEvent2014_10_1_scaffold_85_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8059..9804
DNA (1746bp) protein (582aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacill
1-deoxy-d-xylulose-5-phosphate synthase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EFH1_9LACO rbh
dxs; 1-deoxy-d-xylulose-5-phosphate synthase
NECEvent2014_10_1_scaffold_85_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9851..11359)
DNA (1509bp) protein (503aa)
Gluconate kinase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EN96_9LACO rbh
Gluconate kinase {ECO:0000313|EMBL:EST03384.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
gntK; gluconate kinase rbh
NECEvent2014_10_1_scaffold_85_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11476..11694)
DNA (219bp) protein (73aa)
Uncharacterized protein n=11 Tax=Lactobacillus crispatus RepID=C2KH63_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEJ68743.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
NECEvent2014_10_1_scaffold_85_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11758..12303)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=4 Tax=Lactobacillus crispatus RepID=C2KH62_9LACO rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEX28735.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacill
DNA-directed RNA polymerase sigma factor, sigma h
NECEvent2014_10_1_scaffold_85_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12437..13192)
DNA (756bp) protein (252aa)
RNA methyltransferase, TrmH family, group 3 n=6 Tax=Lactobacillus crispatus RepID=C7XLC6_9LACO rbh
yjfH; RNA methyltransferase, trmh family, group 3 rbh
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFQ44323.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
NECEvent2014_10_1_scaffold_85_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13179..13622)
DNA (444bp) protein (148aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
Mini-ribonuclease 3 n=4 Tax=Lactobacillus crispatus RepID=D4FEQ3_9LACO
ribonuclease iii
NECEvent2014_10_1_scaffold_85_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13615..15048)
DNA (1434bp) protein (478aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=2 Tax=Lactobacillus crispatus RepID=D5H1B1_LACCS rbh
cysS; cysteinyl-tRNA synthetase rbh
NECEvent2014_10_1_scaffold_85_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15139..16638)
DNA (1500bp) protein (500aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=748671 species="Bacteria; Fi
Glutamate--tRNA ligase n=4 Tax=Lactobacillus crispatus RepID=D5H1B0_LACCS rbh
gltX; glutamyl-tRNA synthetase
NECEvent2014_10_1_scaffold_85_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16716..18092)
DNA (1377bp) protein (459aa)
DNA repair protein radA n=9 Tax=Lactobacillus crispatus RepID=D5H1A9_LACCS rbh
radA; DNA repair protein rada
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01
NECEvent2014_10_1_scaffold_85_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18092..18643)
DNA (552bp) protein (184aa)
DUTP diphosphatase {ECO:0000313|EMBL:EEJ68736.1}; EC=3.6.1.23 {ECO:0000313|EMBL:EEJ68736.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" s
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=11 Tax=Lactobacillus crispatus RepID=D5H1A8_LACCS rbh
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase rbh
NECEvent2014_10_1_scaffold_85_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18775..19074
DNA (300bp) protein (100aa)
Conserved protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1A7_LACCS
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CBL49792.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_85_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19142..20491
DNA (1350bp) protein (450aa)
Aminopeptidase C {ECO:0000313|EMBL:EEX28743.1}; EC=3.4.22.40 {ECO:0000313|EMBL:EEX28743.1};; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
Aminopeptidase C n=4 Tax=Lactobacillus crispatus RepID=D0DJV2_9LACO rbh
pepC3; aminopeptidase c
NECEvent2014_10_1_scaffold_85_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20651..20995
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus 214-1 RepID=D4FER0_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEX28744.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein
NECEvent2014_10_1_scaffold_85_26
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21128..23866)
DNA (2739bp) protein (913aa)
Magnesium-translocating P-type ATPase n=2 Tax=Lactobacillus helveticus RepID=A8YTC3_LACH4 rbh
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:ABX26579.1}; TaxID=405566 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helv
magnesium-translocating P-type ATPase rbh
NECEvent2014_10_1_scaffold_85_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24187..25122)
DNA (936bp) protein (312aa)
Kinase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EKL2_9LACO rbh
Kinase {ECO:0000313|EMBL:EST03373.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
kinase
NECEvent2014_10_1_scaffold_85_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25233..25913)
DNA (681bp) protein (227aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=3 Tax=Lactobacillus crispatus RepID=D5H1A2_LACCS rbh
gpmA2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
NECEvent2014_10_1_scaffold_85_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25925..26107)
DNA (183bp) protein (61aa)
Conserved protein n=10 Tax=Lactobacillus crispatus RepID=D5H1A1_LACCS
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CBL49786.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_85_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26116..27015)
DNA (900bp) protein (300aa)
Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XLB4_9LACO rbh
cation efflux protein rbh
Cation efflux protein {ECO:0000313|EMBL:CBL49785.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST
Displaying items 1-30 of 36 in total

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