ggKbase home page

NECEvent2014_10_1_scaffold_97

Alias: Felix_001_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_97_1
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(99..845)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lactobacillus helveticus R0052 RepID=J3WL98_LACHE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFR21431.1}; TaxID=880633 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus R0052.;
NECEvent2014_10_1_scaffold_97_2
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(842..1306)
DNA (465bp) protein (155aa)
Response regulator n=2 Tax=Lactobacillus helveticus RepID=F0NVI5_LACHH
hypothetical protein
Response regulator {ECO:0000313|EMBL:CDI42532.1}; TaxID=1226335 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helveticus CIRM-BIA 95
NECEvent2014_10_1_scaffold_97_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1487..1729)
DNA (243bp) protein (81aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5G964_9LACO
Oligopeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EST02737.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lacto
ABC transporter ATPase/permease
NECEvent2014_10_1_scaffold_97_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1689..3065)
DNA (1377bp) protein (459aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5G964_9LACO rbh
Oligopeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EST02737.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lacto
ABC transporter
NECEvent2014_10_1_scaffold_97_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3052..3810)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DY08_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST02736.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_97_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4022..4843)
DNA (822bp) protein (274aa)
Transcriptional regulator n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EDL8_9LACO rbh
Transcriptional regulator {ECO:0000313|EMBL:EST02735.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC
putative transcriptional regulator rbh
NECEvent2014_10_1_scaffold_97_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4946..5590)
DNA (645bp) protein (215aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELK0_9LACO rbh
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactoba
rex; redox-sensing transcriptional repressor rex
NECEvent2014_10_1_scaffold_97_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5765..7687
DNA (1923bp) protein (641aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XLI8_9LACO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBL49843.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
ABC transporter, ATP-binding protein rbh
NECEvent2014_10_1_scaffold_97_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7803..8468
DNA (666bp) protein (222aa)
oxalyl-CoA decarboxylase (EC:4.1.1.8)
Oxalyl-CoA decarboxylase n=3 Tax=Lactobacillus crispatus RepID=E3R4M0_9LACO
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:EKB78146.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB077-0
NECEvent2014_10_1_scaffold_97_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8513..9010
DNA (498bp) protein (166aa)
Pyruvate oxidase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5G957_9LACO
Pyruvate oxidase {ECO:0000313|EMBL:EST02732.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
oxalyl-CoA decarboxylase
NECEvent2014_10_1_scaffold_97_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9124..9903
DNA (780bp) protein (260aa)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO
formyl-coenzyme A transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XLI6_9LACO
NECEvent2014_10_1_scaffold_97_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9975..10550
DNA (576bp) protein (192aa)
CoA transferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EDL3_9LACO rbh
CoA transferase {ECO:0000313|EMBL:EST02730.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
bile acid-inducible operon protein
NECEvent2014_10_1_scaffold_97_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10782..15917)
DNA (5136bp) protein (1712aa)
Mucus-binding protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELJ5_9LACO rbh
Mucus-binding protein {ECO:0000313|EMBL:EST02729.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
hypothetical protein
NECEvent2014_10_1_scaffold_97_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16142..16471)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EJ32_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EST02728.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_97_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16655..17365)
DNA (711bp) protein (237aa)
Transcriptional regulator, gntr family n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DXZ7_9LACO rbh
Transcriptional regulator, gntr family {ECO:0000313|EMBL:EST02726.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cr
gntR; transcriptional regulator rbh
NECEvent2014_10_1_scaffold_97_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17358..18332)
DNA (975bp) protein (325aa)
Oxidoreductase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EDK9_9LACO rbh
Oxidoreductase {ECO:0000313|EMBL:EST02725.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
Gfo/Idh/MocA family oxidoreductase rbh
NECEvent2014_10_1_scaffold_97_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18341..19054)
DNA (714bp) protein (238aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELJ2_9LACO rbh
Deoxyribose-phosphate aldolase (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) rbh
NECEvent2014_10_1_scaffold_97_18
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19205..20254)
DNA (1050bp) protein (350aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Lactobacillus helveticus RepID=A4ZH39_LACHE rbh
protease rbh
NECEvent2014_10_1_scaffold_97_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20251..20772)
DNA (522bp) protein (174aa)
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Lactobacillus crispatus RepID=D5H1F2_LACCS rbh
rimI; ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CBL49837.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
NECEvent2014_10_1_scaffold_97_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20807..21541)
DNA (735bp) protein (245aa)
Universal bacterial protein YeaZ n=7 Tax=Lactobacillus crispatus RepID=C2KCV4_9LACO rbh
glycoprotein endopeptidase
Glycoprotein endopeptidase {ECO:0000313|EMBL:EST02836.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-L
NECEvent2014_10_1_scaffold_97_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21571..22089)
DNA (519bp) protein (173aa)
Conserved hypothetical membrane protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1F0_LACCS rbh
hypothetical protein rbh
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBL49835.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cr
NECEvent2014_10_1_scaffold_97_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22145..22879)
DNA (735bp) protein (245aa)
Acyl-ACP thioesterase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1E9_LACCS rbh
acyl-acp thioesterase rbh
Acyl-ACP thioesterase {ECO:0000313|EMBL:CBL49834.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST
NECEvent2014_10_1_scaffold_97_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22882..23733)
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Lactobacillus crispatus RepID=D5H1E8_LACCS rbh
tetrapyrrole methylase family protein rbh
NECEvent2014_10_1_scaffold_97_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23733..24092)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=C2KCV8_9LACO
Initiation-control protein YabA {ECO:0000256|SAAS:SAAS00063209}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
initiation-control protein yaba
NECEvent2014_10_1_scaffold_97_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24093..24950)
DNA (858bp) protein (286aa)
DNA polymerase III, delta subunit n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H1E6_LACCS rbh
holB; DNA polymerase iii, delta subunit rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBL49831.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
NECEvent2014_10_1_scaffold_97_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24950..25270)
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Lactobacillus crispatus RepID=K1MR95_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EST02830.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_97_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25283..25933)
DNA (651bp) protein (217aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli
Thymidylate kinase n=5 Tax=Lactobacillus crispatus RepID=D5H1E4_LACCS rbh
tmk; thymidylate kinase rbh
NECEvent2014_10_1_scaffold_97_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26024..26263)
DNA (240bp) protein (80aa)
Conserved protein n=11 Tax=Lactobacillus crispatus RepID=D5H1E3_LACCS
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CBL49828.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_97_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26263..26820)
DNA (558bp) protein (186aa)
Recombination protein RecR n=4 Tax=Lactobacillus crispatus RepID=D5H1E2_LACCS rbh
recR; recombination protein recr
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" s
NECEvent2014_10_1_scaffold_97_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26863..27198)
DNA (336bp) protein (112aa)
Nucleoid-associated protein LCRIS_00379 n=8 Tax=Lactobacillus crispatus RepID=D5H1E1_LACCS
hypothetical protein
Nucleoid-associated protein LBKG_01317 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
Displaying items 1-30 of 32 in total

View Taxonomy