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NECEvent2014_10_1_scaffold_101

Alias: Felix_001_scaffold_101

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_101_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Putative oxidoreductase, LLM family n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3C0_9LACO
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AJC07904.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_101_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(373..1761)
DNA (1389bp) protein (463aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=4 Tax=Lactobacillus crispatus RepID=C2KBC2_9LACO rbh
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EEJ70778.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
major facilitator superfamily permease
NECEvent2014_10_1_scaffold_101_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1748..2176)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=4 Tax=Lactobacillus crispatus RepID=C2KBC1_9LACO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEJ70777.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
transcriptional regulator
NECEvent2014_10_1_scaffold_101_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2375..2956
DNA (582bp) protein (194aa)
Transcriptional regulator, LysR family n=8 Tax=Lactobacillus crispatus RepID=C2KBC0_9LACO rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEX30497.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
fhu operon transcription regulator
NECEvent2014_10_1_scaffold_101_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3023..3181)
DNA (159bp) protein (53aa)
Uncharacterized protein n=7 Tax=Lactobacillus crispatus RepID=C2KBB9_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEJ70780.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
NECEvent2014_10_1_scaffold_101_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3360..3854
DNA (495bp) protein (165aa)
Thiol peroxidase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EEZ1_9LACO rbh
Thiol peroxidase {ECO:0000313|EMBL:EST03210.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
tpx; thiol peroxidase
NECEvent2014_10_1_scaffold_101_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3911..5650)
DNA (1740bp) protein (580aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H304_LACCS rbh
Uncharacterized protein {ECO:0000313|EMBL:EEU19633.1}; Flags: Fragment;; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
hypothetical protein rbh
NECEvent2014_10_1_scaffold_101_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5767..7143)
DNA (1377bp) protein (459aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Lactobacillus crispatus CTV-05 RepID=E3R2N5_9LACO rbh
brnQ; branched-chain amino acid transport protein rbh
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EFQ44674.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
NECEvent2014_10_1_scaffold_101_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7528..8151)
DNA (624bp) protein (208aa)
Hydrolase, NUDIX family n=5 Tax=Lactobacillus crispatus RepID=C2KBB5_9LACO rbh
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEJ70785.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
mutt/nudix family protein
NECEvent2014_10_1_scaffold_101_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8138..9268)
DNA (1131bp) protein (377aa)
Low temperature requirement protein LtrA n=1 Tax=Lactobacillus crispatus CTV-05 RepID=E3R2N3_9LACO rbh
Low temperature requirement protein LtrA {ECO:0000313|EMBL:EFQ44672.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus c
hypothetical protein
NECEvent2014_10_1_scaffold_101_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9394..10077
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAN3_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03202.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
integral hypothetical protein rbh
NECEvent2014_10_1_scaffold_101_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10380..11930)
DNA (1551bp) protein (517aa)
ABC transporter, ATP-binding protein n=5 Tax=Lactobacillus crispatus RepID=C2KCM4_9LACO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEJ70325.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
ABC transporter, ATP-binding protein
NECEvent2014_10_1_scaffold_101_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12081..12422)
DNA (342bp) protein (114aa)
Alpha/beta hydrolase superfamily protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EEY1_9LACO
Alpha/beta hydrolase superfamily protein {ECO:0000313|EMBL:EST03200.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
alpha/beta hydrolase superfamily protein
NECEvent2014_10_1_scaffold_101_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12447..12716)
DNA (270bp) protein (90aa)
Alpha/beta hydrolase superfamily protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2Z8_LACCS
alpha/beta hydrolase superfamily protein
Alpha/beta hydrolase superfamily protein {ECO:0000313|EMBL:CBL50383.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus c
NECEvent2014_10_1_scaffold_101_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12836..13699
DNA (864bp) protein (288aa)
Transcriptional regulator n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EMT0_9LACO rbh
Transcriptional regulator {ECO:0000313|EMBL:EST03199.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC
transcriptional regulator rbh
NECEvent2014_10_1_scaffold_101_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13858..14295
DNA (438bp) protein (146aa)
Response regulator of the LytR/AlgR family n=2 Tax=Lactobacillus crispatus RepID=D5H2Z6_LACCS
response regulator of the lytr/algr family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL50381.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_101_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14297..14710
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAM7_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EST03197.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_101_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14774..15568)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZ82_9LACO rbh
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EST03196.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus c
short-chain dehydrogenase/reductase sdr rbh
NECEvent2014_10_1_scaffold_101_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15720..15908)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2Z3_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL50378.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_101_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15971..17053
DNA (1083bp) protein (361aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Lactobacillus crispatus FB077-07 RepID=K1NRZ8_9LACO rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
ribD; riboflavin biosynthesis protein ribd
NECEvent2014_10_1_scaffold_101_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17046..17642
DNA (597bp) protein (199aa)
Riboflavin synthase, alpha subunit n=3 Tax=Lactobacillus crispatus RepID=D5H2Z1_LACCS rbh
ribE; riboflavin synthase, alpha subunit
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:CBL50376.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispat
NECEvent2014_10_1_scaffold_101_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17644..18822
DNA (1179bp) protein (393aa)
GTP cyclohydrolase II n=2 Tax=Lactobacillus crispatus RepID=C7XH74_9LACO rbh
ribA; GTP cyclohydrolase ii rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|SAAS:SAAS00280052}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cr
NECEvent2014_10_1_scaffold_101_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18837..19301
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase n=5 Tax=Lactobacillus crispatus RepID=D5H2Y9_LACCS rbh
ribH; riboflavin synthase, beta subunit rbh
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
NECEvent2014_10_1_scaffold_101_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19379..19576)
DNA (198bp) protein (66aa)
RNA-directed DNA polymerase n=4 Tax=Lactobacillus crispatus RepID=D5H2Y8_LACCS
RNA-directed DNA polymerase
Group II intron, maturase-specific domain protein {ECO:0000313|EMBL:EEJ70351.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactob
NECEvent2014_10_1_scaffold_101_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19576..20373)
DNA (798bp) protein (266aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=5 Tax=Lactobacillus crispatus RepID=E3R2J7_9LACO rbh
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EEJ69577.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lac
reverse transcriptase
NECEvent2014_10_1_scaffold_101_26
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20942..21397)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus FB049-03 RepID=K1MDF7_9LACO
transposase
Transposase {ECO:0000313|EMBL:AEA32854.1}; TaxID=695562 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain GRL 1118).;
NECEvent2014_10_1_scaffold_101_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21515..22612)
DNA (1098bp) protein (366aa)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source=
Glycosyl hydrolase family 8 n=3 Tax=Lactobacillus crispatus RepID=C2KCJ2_9LACO rbh
endoglucanase
NECEvent2014_10_1_scaffold_101_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22612..23919)
DNA (1308bp) protein (436aa)
Glycosyl transferase, family 2 n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZ72_9LACO rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EST03186.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
glycosyl transferase, family 2
NECEvent2014_10_1_scaffold_101_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23912..24055)
DNA (144bp) protein (48aa)
Uncharacterized protein n=4 Tax=Lactobacillus RepID=C2KCJ0_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEX30452.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein
NECEvent2014_10_1_scaffold_101_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24060..24911)
DNA (852bp) protein (284aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=C2KCI9_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEJ70356.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
hypothetical protein
Displaying items 1-30 of 34 in total

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