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NECEvent2014_10_1_scaffold_172

Alias: Felix_001_scaffold_172

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_172_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(94..672)
DNA (579bp) protein (193aa)
Glucan 1,6-alpha-glucosidase n=2 Tax=Lactobacillus crispatus RepID=D0DIT0_9LACO
dexB; alpha,alpha-phosphotrehalase
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EST03303.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM
NECEvent2014_10_1_scaffold_172_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

788..1615
DNA (828bp) protein (276aa)
Had superfamily hydrolase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAZ4_9LACO rbh
Had superfamily hydrolase {ECO:0000313|EMBL:EST03302.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC
had superfamily hydrolase
NECEvent2014_10_1_scaffold_172_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1661..3208)
DNA (1548bp) protein (516aa)
Amino acid permease n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZI5_9LACO rbh
Amino acid permease {ECO:0000313|EMBL:EST03301.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
amino acid permease
NECEvent2014_10_1_scaffold_172_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3367..4602)
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H126_LACCS rbh
glyA; serine hydroxymethyltransferase rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL49711.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
NECEvent2014_10_1_scaffold_172_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4661..4936)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EN10_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EST03299.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_172_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4917..5261)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=D4FCV0_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEJ69596.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
hypothetical protein
NECEvent2014_10_1_scaffold_172_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5575..6576)
DNA (1002bp) protein (334aa)
Dehydrogenase, FMN-dependent {ECO:0000313|EMBL:EEJ69594.1}; EC=1.1.3.15 {ECO:0000313|EMBL:EEJ69594.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobac
Dehydrogenase, FMN-dependent n=1 Tax=Lactobacillus crispatus 214-1 RepID=D4FCU9_9LACO rbh
glycolate oxidase rbh
NECEvent2014_10_1_scaffold_172_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6589..7788)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAZ0_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03297.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
chloride channel protein rbh
NECEvent2014_10_1_scaffold_172_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7934..8449
DNA (516bp) protein (172aa)
Conserved protein n=10 Tax=Lactobacillus crispatus RepID=D5H117_LACCS rbh
hypothetical protein rbh
Conserved protein {ECO:0000313|EMBL:CBL49702.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_172_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8519..9028
DNA (510bp) protein (170aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EF79_9LACO rbh
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EST03295.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lact
ogt2; methylated-DNA--protein-cysteine methyltransferase rbh
NECEvent2014_10_1_scaffold_172_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9474..10496)
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase, zinc-binding n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H111_LACCS rbh
alcohol dehydrogenase, zinc-binding rbh
Alcohol dehydrogenase, zinc-binding {ECO:0000313|EMBL:CBL49696.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispa
NECEvent2014_10_1_scaffold_172_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10646..10981
DNA (336bp) protein (112aa)
Transcriptional regulator n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H110_LACCS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL49695.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_172_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11109..11297
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H109_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL49694.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_172_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11533..11715)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H108_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL49693.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_172_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11724..12050
DNA (327bp) protein (109aa)
Transcriptional regulator n=2 Tax=Lactobacillus crispatus RepID=D5H107_LACCS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL49692.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_172_16
unknown

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12028..12162
DNA (135bp) protein (45aa)

This feature has no annotations

NECEvent2014_10_1_scaffold_172_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12159..12287)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=D4FFP6_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EKB79444.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB077-07
NECEvent2014_10_1_scaffold_172_18
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12507..12935)
DNA (429bp) protein (143aa)
Putative secreted protein n=1 Tax=Lactobacillus johnsonii (strain FI9785) RepID=D0R2R6_LACJF
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CAX65971.1}; TaxID=633699 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii (strai
Displaying 18 items

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