ggKbase home page

NECEvent2014_10_1_scaffold_22_105

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(107442..108677)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase, DEAD-DEAH box n=10 Tax=Lactobacillus crispatus RepID=D5H233_LACCS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 411.0
  • Bit_score: 816
  • Evalue 1.30e-233
  • rbh
ATP-dependent RNA helicase, dead-deah box similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 411.0
  • Bit_score: 816
  • Evalue 3.70e-234
  • rbh
ATP-dependent RNA helicase, dead-deah box {ECO:0000313|EMBL:EST03854.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 411.0
  • Bit_score: 816
  • Evalue 1.90e-233

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1236
ATGTATCAAGAAAAAATCAAACAAGTTTTAATTAGAGAACACAAGGACCAGCCAACTTTAATTCAAAAAGAAAGCTATGATGCCATTCGCAATGGCGCGAGCCTGGTTGGATTGGCTAAGACAGGTACGGGTAAGACATTGGCTTATGCACTTCCTAGTTTGGAAAAAGCACAGCCAGGTAATGCTAACAGCGTGGTAATTATTGCGCCAACGACTGAATTAGCTGTACAAATTCGTCATGCAATTAATCCTTACATCCACGCTTTAGGATTAAAAGGCGTCAGCTTGGTTGGTGCTGGCAATAGAAAGAGACAAGAAGACAATCTGAAGAAAAAGCATCCTGAAGTGGTCGTAGCTACACCAGGCCGTTTTTTTGACTTCTTCTCAAGTGGTCGAATTAAAGTAAACCAGATCAAGACTTTGATTATTGATGAAGCCGATGATATTTTAGAATTTACTAAAATGGAATTGTTATCAGCATTAGGGCAAAATCTGGGTCCAGACAGTCAAATCTTATTATTTGGAGCAACAGATTCTGAGATTACACGGGATGCGGAGCAAGTTTTTAACCGTCATTTCTTGTTAGTAGATGTCAGAAATGAACAAGCTTCAGCGACTAAACATTATTTTTTGCAAGTAGACAATCAACACAAGATTGAATTTTTGCAGCGAATGACTAAGTTGGATCACTTTAAGGGAATTTTGTTCTTTGATTCAAATAAAACGATGATGCGCTTTGCTGGTATTTTTGGGCATACTAAGACTAAGTTCGAATTATTAGCTAATGAATTTGGTAAAGAACGCCGTGAAAAAGCCTTAAATGACCTAGCTACTGGTAAGACGAAATTGCTGCTGGCAACGGATTTGGCTGCGCGTGGGTTGGACATTCCAGGCCTTACCTATGTGATTAATTTTGATATTCCGAGCGAGACTAATACTTACATGCACCGGGCAGGAAGAACAGGTCGAATGAACGCTGAAGGTTATGTGGTTACTTTAGGCGATGATCACGATTTTCGTGATTTGAAGAAATTATTGGCAGATCAATTACAAATAGAGCGTGTCTACTTTGCAGGCTATCATTTAACAACTGAAAAGCCTAAACTCAAGAAGGAAAAGAAGCAGGCTAAAGAGCAGCCCATTAAGACTTCGACTAAGAAAAATAAAACTAAAAAACGCAAGAAACGTAATAAGAACAAGGGATATCATCCACATTACTTGAAAGGAAAGAAATGA
PROTEIN sequence
Length: 412
MYQEKIKQVLIREHKDQPTLIQKESYDAIRNGASLVGLAKTGTGKTLAYALPSLEKAQPGNANSVVIIAPTTELAVQIRHAINPYIHALGLKGVSLVGAGNRKRQEDNLKKKHPEVVVATPGRFFDFFSSGRIKVNQIKTLIIDEADDILEFTKMELLSALGQNLGPDSQILLFGATDSEITRDAEQVFNRHFLLVDVRNEQASATKHYFLQVDNQHKIEFLQRMTKLDHFKGILFFDSNKTMMRFAGIFGHTKTKFELLANEFGKERREKALNDLATGKTKLLLATDLAARGLDIPGLTYVINFDIPSETNTYMHRAGRTGRMNAEGYVVTLGDDHDFRDLKKLLADQLQIERVYFAGYHLTTEKPKLKKEKKQAKEQPIKTSTKKNKTKKRKKRNKNKGYHPHYLKGKK*