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NECEvent2014_10_1_scaffold_22

Alias: Felix_001_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_22_1
unknown

Not on your lists

comp(43..273)
DNA (231bp) protein (77aa)

This feature has no annotations

NECEvent2014_10_1_scaffold_22_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(289..1239)
DNA (951bp) protein (317aa)
Hydrolase of the alpha/beta superfamily n=2 Tax=Lactobacillus crispatus RepID=D5H2E4_LACCS rbh
hydrolase of the alpha/beta superfamily rbh
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:CBL50179.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cr
NECEvent2014_10_1_scaffold_22_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1411..2886)
DNA (1476bp) protein (492aa)
6-phospho-beta-glucosidase n=2 Tax=Lactobacillus crispatus RepID=D5H2E3_LACCS rbh
bglA1; 6-phospho-beta-glucosidase
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EST03955.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-L
NECEvent2014_10_1_scaffold_22_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2928..4949)
DNA (2022bp) protein (674aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EEU19418.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEU19418.1};; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; La
PTS system, beta-glucoside-specific, IIABC component n=6 Tax=Lactobacillus crispatus RepID=C7XH13_9LACO rbh
bglF1; PTS system beta-glucoside-specific iiABC subunit
NECEvent2014_10_1_scaffold_22_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5077..5910)
DNA (834bp) protein (278aa)
Transcription antiterminator n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2E1_LACCS rbh
bglG1; transcription antiterminator rbh
Transcription antiterminator {ECO:0000313|EMBL:CBL50176.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (st
NECEvent2014_10_1_scaffold_22_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6119..7264
DNA (1146bp) protein (382aa)
Glycerate kinase {ECO:0000313|EMBL:EEJ70541.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EEJ70541.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
Glycerate kinase n=2 Tax=Lactobacillus crispatus RepID=C2KBT8_9LACO rbh
glxK; glycerate kinase rbh
NECEvent2014_10_1_scaffold_22_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7288..7743)
DNA (456bp) protein (152aa)
Phosphotyrosine protein phosphatase n=10 Tax=Lactobacillus crispatus RepID=D5H2D9_LACCS rbh
ptpA; phosphotyrosine protein phosphatase
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CBL50174.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispa
NECEvent2014_10_1_scaffold_22_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7743..8459)
DNA (717bp) protein (239aa)
Conserved protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2D8_LACCS rbh
hypothetical protein rbh
Conserved protein {ECO:0000313|EMBL:CBL50173.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_22_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8474..8914)
DNA (441bp) protein (147aa)
Copper transport repressor, CopY/TcrY family n=9 Tax=Lactobacillus crispatus RepID=C2KBT5_9LACO
Copper transport repressor, CopY/TcrY family {ECO:0000313|EMBL:EEX30274.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacill
copY; transcriptional repressor copy
NECEvent2014_10_1_scaffold_22_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8945..9760)
DNA (816bp) protein (272aa)
HAD superfamily hydrolase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2D6_LACCS rbh
had superfamily hydrolase rbh
HAD superfamily hydrolase {ECO:0000313|EMBL:CBL50171.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_22_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9861..11213)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=883092 species="Bacteri
Phosphoglucosamine mutase n=9 Tax=Lactobacillus crispatus RepID=C2KBT3_9LACO rbh
glmM; phosphoglucosamine mutase
NECEvent2014_10_1_scaffold_22_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11236..12195)
DNA (960bp) protein (320aa)
YbbR n=8 Tax=Lactobacillus crispatus RepID=D5H2D4_LACCS rbh
ybbR; ybbr rbh
YbbR {ECO:0000313|EMBL:CBL50169.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_22_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12192..13034)
DNA (843bp) protein (281aa)
TIGR00159 family protein n=11 Tax=Lactobacillus crispatus RepID=C2KBT1_9LACO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EST03945.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
NECEvent2014_10_1_scaffold_22_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13073..14146)
DNA (1074bp) protein (358aa)
Spermidine/putrescine ABC transporter n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EPX7_9LACO rbh
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:EST03944.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
potD; spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein (potd)
NECEvent2014_10_1_scaffold_22_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14143..14958)
DNA (816bp) protein (272aa)
Spermidine/putrescine ABC transporter, permease protein (PotC) n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2D1_LACCS rbh
potC; spermidine/putrescine ABC transporter, permease protein (potc) rbh
Spermidine/putrescine ABC transporter, permease protein (PotC) {ECO:0000313|EMBL:CBL50166.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" s
NECEvent2014_10_1_scaffold_22_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14955..15767)
DNA (813bp) protein (271aa)
Spermidine/putrescine ABC transporter, permease protein (Potb) n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GCW4_9LACO rbh
Spermidine/putrescine ABC transporter, permease protein (Potb) {ECO:0000313|EMBL:EST03942.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;"
potB; spermidine/putrescine ABC transporter, permease protein (potb) rbh
NECEvent2014_10_1_scaffold_22_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15757..16854)
DNA (1098bp) protein (366aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobaci
Spermidine/putrescine ABC transporter, ATP-binding protein (Pota) n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5E1B1_9LACO rbh
potA; spermidine/putrescine ABC transporter, ATP-binding protein (pota)
NECEvent2014_10_1_scaffold_22_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16921..17817)
DNA (897bp) protein (299aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Lactobacillus crispatus RepID=D5H2C8_LACCS rbh
murB; UDP-N-acetylenolpyruvoylglucosamine reductase rbh
NECEvent2014_10_1_scaffold_22_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17913..18446
DNA (534bp) protein (178aa)
Exonuclease n=8 Tax=Lactobacillus crispatus RepID=C2KBS5_9LACO rbh
Exonuclease {ECO:0000313|EMBL:EFQ44506.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus CTV-05.;"
dnaQ1; DNA polymerase iii, epsilon subunit related 3'-5' exonuclease rbh
NECEvent2014_10_1_scaffold_22_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18484..18963)
DNA (480bp) protein (160aa)
ATPase or kinase n=2 Tax=Lactobacillus crispatus RepID=D5H2C6_LACCS rbh
atpase or kinase rbh
ATPase or kinase {ECO:0000313|EMBL:CBL50161.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_22_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18963..19952)
DNA (990bp) protein (330aa)
Phosphate acetyltransferase n=2 Tax=Lactobacillus crispatus RepID=D5H2C5_LACCS rbh
pta; phosphate acetyltransferase rbh
Phosphate acetyltransferase {ECO:0000313|EMBL:EST03937.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-
NECEvent2014_10_1_scaffold_22_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19963..20661)
DNA (699bp) protein (233aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
Uracil-DNA glycosylase n=10 Tax=Lactobacillus crispatus RepID=C2KBS2_9LACO rbh
ung; uracil-DNA glycosylase rbh
NECEvent2014_10_1_scaffold_22_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20729..21604
DNA (876bp) protein (292aa)
Had superfamily hydrolase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EH43_9LACO rbh
Had superfamily hydrolase {ECO:0000313|EMBL:EST03935.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC
had superfamily hydrolase rbh
NECEvent2014_10_1_scaffold_22_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21624..22139
DNA (516bp) protein (172aa)
Conserved protein n=10 Tax=Lactobacillus crispatus RepID=D5H2C2_LACCS rbh
hypothetical protein rbh
Conserved protein {ECO:0000313|EMBL:CBL50157.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;
NECEvent2014_10_1_scaffold_22_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22626..23384)
DNA (759bp) protein (253aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=11 Tax=Lactobacillus crispatus RepID=D5H2C1_LACCS rbh
tpiA; triosephosphate isomerase
NECEvent2014_10_1_scaffold_22_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23409..24620)
DNA (1212bp) protein (404aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=491076 species="Bacteria;
Phosphoglycerate kinase n=9 Tax=Lactobacillus crispatus RepID=C2KBR7_9LACO rbh
pgk; phosphoglycerate kinase
NECEvent2014_10_1_scaffold_22_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24735..25751)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacil
Glyceraldehyde-3-phosphate dehydrogenase n=12 Tax=Lactobacillus crispatus RepID=D5H2B9_LACCS rbh
gapA; glyceraldehyde-3-phosphate dehydrogenase rbh
NECEvent2014_10_1_scaffold_22_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25804..26835)
DNA (1032bp) protein (344aa)
Central glycolytic regulator n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EH39_9LACO rbh
Central glycolytic regulator {ECO:0000313|EMBL:EST03930.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM
cggR; central glycolytic genes regulator rbh
NECEvent2014_10_1_scaffold_22_trna_1
unknown

Not on your lists

27083..27154
DNA (72bp)
transferRNA
NECEvent2014_10_1_scaffold_22_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27250..28782)
DNA (1533bp) protein (511aa)
Protein with bacterial ig-like domain n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EPW3_9LACO rbh
Protein with bacterial ig-like domain {ECO:0000313|EMBL:EST03929.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
conserved protein with bacterial ig-like domain
Displaying items 1-30 of 111 in total

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