ggKbase home page

NECEvent2014_10_1_scaffold_22

Alias: Felix_001_scaffold_22

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_22_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28952..30385
DNA (1434bp) protein (478aa)
Amino acid permease n=6 Tax=Lactobacillus crispatus RepID=C2KBR3_9LACO rbh
Amino acid permease {ECO:0000313|EMBL:EEX30252.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US.;"
amino acid permease
NECEvent2014_10_1_scaffold_22_31
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30452..31237)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GCU5_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03927.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_22_32
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31321..31758)
DNA (438bp) protein (146aa)
Transcriptional regulator, MerR family n=2 Tax=Lactobacillus crispatus RepID=D5H2B4_LACCS
transcriptional regulator, merr family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBL50149.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
NECEvent2014_10_1_scaffold_22_33
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31919..33391
DNA (1473bp) protein (491aa)
Drug resistance transporter, EmrB/QacA family protein n=2 Tax=Lactobacillus crispatus RepID=D5H2B3_LACCS rbh
drug resistance transporter, emrb/qaca family protein
Major facilitator superfamily transporter permease, emrb/qaca family protein {ECO:0000313|EMBL:EST03925.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lac
NECEvent2014_10_1_scaffold_22_34
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33392..33952
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=D4FCF1_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEU19383.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 125-2-CH
hypothetical protein
NECEvent2014_10_1_scaffold_22_35
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34199..34957)
DNA (759bp) protein (253aa)
ABC-type transport system, permease component n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELV4_9LACO rbh
ABC-type transport system, permease component {ECO:0000313|EMBL:EST03923.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobaci
ybbM; ABC-type transport system, permease component
NECEvent2014_10_1_scaffold_22_36
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34954..35592)
DNA (639bp) protein (213aa)
ABC transporter, ATP-binding protein n=9 Tax=Lactobacillus crispatus RepID=C2KBQ6_9LACO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ44526.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
ybbL; ABC transporter, ATP-binding protein
NECEvent2014_10_1_scaffold_22_37
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35701..37329)
DNA (1629bp) protein (543aa)
Conserved protein with bacterial Ig-like domain n=10 Tax=Lactobacillus crispatus RepID=D5H2A9_LACCS rbh
Bacterial group 3 Ig-like protein {ECO:0000313|EMBL:EEJ70704.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
conserved protein with bacterial ig-like domain
NECEvent2014_10_1_scaffold_22_38
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37524..38108
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=13 Tax=Lactobacillus RepID=D5H2A8_LACCS rbh
clpP; ATP-dependent clp protease proteolytic subunit rbh
NECEvent2014_10_1_scaffold_22_39
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38173..39108)
DNA (936bp) protein (312aa)
Putative sporulation transcription regulator WhiA n=8 Tax=Lactobacillus crispatus RepID=D5H2A7_LACCS rbh
whiA; sporulation transcription regulator whia rbh
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillac
NECEvent2014_10_1_scaffold_22_40
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(39101..40144)
DNA (1044bp) protein (348aa)
Putative gluconeogenesis factor n=7 Tax=Lactobacillus crispatus RepID=C2KBQ2_9LACO rbh
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp
transporter rbh
NECEvent2014_10_1_scaffold_22_41
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40155..41036)
DNA (882bp) protein (294aa)
UPF0042 nucleotide-binding protein LCRIS_00693 n=6 Tax=Lactobacillus crispatus RepID=D5H2A5_LACCS rbh
P-loop ATPase
Nucleotide-binding protein HMPREF0506_0276 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobaci
NECEvent2014_10_1_scaffold_22_42
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41130..41672)
DNA (543bp) protein (181aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=C7XGA8_9LACO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EEU19375.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 125-2-CH
NECEvent2014_10_1_scaffold_22_43
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41745..44585)
DNA (2841bp) protein (947aa)
UvrABC system protein A n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EH22_9LACO rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA1; uvrABC system protein a
NECEvent2014_10_1_scaffold_22_44
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(44575..46620)
DNA (2046bp) protein (682aa)
UvrABC system protein B n=2 Tax=Lactobacillus crispatus RepID=C7XGA6_9LACO rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; uvrABC system protein b rbh
NECEvent2014_10_1_scaffold_22_45
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(46723..48447)
DNA (1725bp) protein (575aa)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEJ70696.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EEJ70696.1};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactoba
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=8 Tax=Lactobacillus crispatus RepID=C2KBP7_9LACO rbh
pgm2; phosphoglucomutase
NECEvent2014_10_1_scaffold_22_46
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(48614..49552)
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillu
Thioredoxin reductase n=11 Tax=Lactobacillus crispatus RepID=D5H2A0_LACCS rbh
trxB2; thioredoxin reductase
NECEvent2014_10_1_scaffold_22_47
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(49634..50653)
DNA (1020bp) protein (340aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Lactobacillus crispatus RepID=D5H299_LACCS rbh
gpsA; glycerol-3-phosphate dehydrogenase [nad(p) ] rbh
NECEvent2014_10_1_scaffold_22_48
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(50694..51533)
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=575595
Prolipoprotein diacylglyceryl transferase n=2 Tax=Lactobacillus crispatus RepID=C7XHN1_9LACO rbh
lgt; prolipoprotein diacylglyceryl transferase rbh
NECEvent2014_10_1_scaffold_22_49
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(51526..52494)
DNA (969bp) protein (323aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=9 Tax=Lactobacillus crispatus RepID=D5H297_LACCS rbh
ptsK; hpr kinase/phosphorylase rbh
NECEvent2014_10_1_scaffold_22_50
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52509..52781)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=V5ELU1_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL50131.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_22_51
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52790..53788)
DNA (999bp) protein (333aa)
Peptide chain release factor 2 n=8 Tax=Lactobacillus crispatus RepID=D5H295_LACCS rbh
prfB; peptide chain release factor 2 rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
NECEvent2014_10_1_scaffold_22_52
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(53971..56370)
DNA (2400bp) protein (800aa)
Protein translocase subunit SecA n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H294_LACCS rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
secA; protein translocase subunit seca rbh
NECEvent2014_10_1_scaffold_22_53
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(56512..57057)
DNA (546bp) protein (182aa)
Ribosomal subunit interface protein n=9 Tax=Lactobacillus crispatus RepID=E3R491_9LACO rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:EFQ44540.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispa
sigma-54 modulation protein
NECEvent2014_10_1_scaffold_22_54
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(57138..57833)
DNA (696bp) protein (232aa)
Competence protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H292_LACCS rbh
comFC; competence protein rbh
Competence protein {ECO:0000313|EMBL:CBL50127.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).
NECEvent2014_10_1_scaffold_22_55
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(57830..59110)
DNA (1281bp) protein (427aa)
Helicase C-terminal domain protein n=6 Tax=Lactobacillus crispatus RepID=C2KBN7_9LACO rbh
Putative ComF operon protein 1 {ECO:0000313|EMBL:EEU19362.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 1
comFA; comf operon protein 1 rbh
NECEvent2014_10_1_scaffold_22_56
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

59156..59818
DNA (663bp) protein (221aa)
YvyE n=10 Tax=Lactobacillus crispatus RepID=D5H290_LACCS rbh
yvyE; yvye
YigZ family protein {ECO:0000313|EMBL:EEJ70685.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;"
NECEvent2014_10_1_scaffold_22_57
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(59853..61010)
DNA (1158bp) protein (386aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EEU19360.1}; EC=2.7.8.- {ECO:0000313|EMBL:EEU19360.1};; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; La
Glycosyl transferase, group 4 family protein n=10 Tax=Lactobacillus crispatus RepID=D5H289_LACCS rbh
rfe; glycosyl transferase, group 4 family protein
NECEvent2014_10_1_scaffold_22_58
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(61114..62751)
DNA (1638bp) protein (546aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli;
Ribonuclease Y n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EH05_9LACO rbh
ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase
NECEvent2014_10_1_scaffold_22_59
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(62867..63967)
DNA (1101bp) protein (367aa)
Protein RecA n=2 Tax=Lactobacillus crispatus RepID=D5H287_LACCS rbh
recA; protein reca rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=748671 species="Bacteria; Firmicute
Displaying items 31-60 of 111 in total

View Taxonomy