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NECEvent2014_10_1_scaffold_22_53

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(56512..57057)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=9 Tax=Lactobacillus crispatus RepID=E3R491_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 361
  • Evalue 3.90e-97
  • rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:EFQ44540.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispa similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 361
  • Evalue 5.50e-97
sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 181.0
  • Bit_score: 358
  • Evalue 9.40e-97

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
ATGTTAAAGTACAATGTTCGTGGAGAAAATATTGAAGTAACTGATGCTTTGAGAAGCTATGTAGAAAAGCGGTTAAACAAGTTAGAGAAGTACTTCGAATTGAATCAAGATGTGATTGCACACGTAAACTTGAGAGTATACCGTGATCACTCAGCTAAAGTTGAAGTTACTATTCCTTTACCATACTTAGTTTTGAGAGCCGAAGAAACCACGGATGACATGTATCGTAGCATTGACTTCGTTTCTGAAAAACTCGAACGTCAAATTAGAAAGTACAAGACTCGTGTAAATAGAAAGAGTCGTGAAAAGGGATTACAAGATTTCTTTGTAGAACAACCTGAAGAAGAAGAAAAGAAGCCTAGCGAATTTGATATTGTTCGTAACAAGCGTGTAAGCTTAAAGCCAATGGATCCAGAAGAAGCTATTTTACAAATGGACATGTTGGAACATGACTTCTTCGTATTTGAAGATGCAGAAACTAACGGCACTAGCGTTGTTTACCGTAGAAACGATGGTCGTTACGGTTTGATTGAAACTAACGAATAA
PROTEIN sequence
Length: 182
MLKYNVRGENIEVTDALRSYVEKRLNKLEKYFELNQDVIAHVNLRVYRDHSAKVEVTIPLPYLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSREKGLQDFFVEQPEEEEKKPSEFDIVRNKRVSLKPMDPEEAILQMDMLEHDFFVFEDAETNGTSVVYRRNDGRYGLIETNE*