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NECEvent2014_10_1_scaffold_22_35

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(34199..34957)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, permease component n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ELV4_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 3.90e-135
  • rbh
ABC-type transport system, permease component {ECO:0000313|EMBL:EST03923.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 5.40e-135
ybbM; ABC-type transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 252.0
  • Bit_score: 483
  • Evalue 2.70e-134

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGAAAAATGTTGTAGTTAGCAACTGGTCGTTAGTATTAGCTTTTGCACTGGTGTTAGTTTCCATTGGAATTTCTGCGAAAGAAAAATTAGGACTAACCAAGGATATTTTAATTAGCGTGATTAGGGCGATAATTCAGTTAGTCGTAATCGGCTACGTTTTGAAGTTTATTTTTCATGTTAATGCCTTGTGGCTAACTTTGGTTTCAACTATTGTGATAATTTTTAATGCATCTTGGAATGCTAATCAGCGTGATCCTAATCCGGGGCGGAATATTTGGAATTCGATAATAGCCGAAGCGGTAGGGACTTACGCGACATTAGGAATTCTGATTTTTTCTGGCGTAATTAAACCAGTCCCTATGCAGGTCATTCCCATTACGGGGATGATTGCTGGAAATGAAATGGTGGCAGTTGGCTTATGCTATAAAGCGTTGAATGATAGCTTTAATGATCTGCATCAACAAGTTTTAGAAAAGTTGGCTTTGGGTAGTGATATTAAAACTGCATCGATGCCAATTTTAAGAAGGAGCATTAAGACTGCGATGCAGCCTACGATAGATTCGGCTAAAACTGTAGGATTAGTAAATTTGCCAGGAATGATGTCCGGCTTAATTTTTGCTGGTGTAAATCCCATTTATGCAATTAAGTATCAGATTATGATTACATTTATGTTGCTTTCTGCCACTGGCCTTGGAGCCGTGATTAGTGGCTATTTGGCTTATAAAAATTACTTTAATGATAGGATGCAATTGAAATAG
PROTEIN sequence
Length: 253
MKNVVVSNWSLVLAFALVLVSIGISAKEKLGLTKDILISVIRAIIQLVVIGYVLKFIFHVNALWLTLVSTIVIIFNASWNANQRDPNPGRNIWNSIIAEAVGTYATLGILIFSGVIKPVPMQVIPITGMIAGNEMVAVGLCYKALNDSFNDLHQQVLEKLALGSDIKTASMPILRRSIKTAMQPTIDSAKTVGLVNLPGMMSGLIFAGVNPIYAIKYQIMITFMLLSATGLGAVISGYLAYKNYFNDRMQLK*