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NECEvent2014_10_1_scaffold_49_30

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31033..31926

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 590
  • Evalue 1.20e-165
tRNA pseudouridine synthase B n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EJI7_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 590
  • Evalue 8.60e-166
  • rbh
truB; tRNA pseudouridine synthase b similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 283.0
  • Bit_score: 563
  • Evalue 4.10e-158
  • rbh

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGTTAAACGGAATTTTAGTTATTGATAAAGATAAAGGGATGACTAGTGCAGATGTAGTTTATCATTTGCGCCGCGTATTAAATATTAGAAAAATAGGACATGCTGGTACGCTTGATCCTGAGGTGACAGGCGTTTTACCAATTGCTATTGGTCAGGCTACTAAATTAATTGAAATGATGCATACTAGGCCAAAAGAATATATTGGCACGGGACTATTTGGTTATAGCACAGATAGTTATGATGCAACTGGAACTGTTTTAAAAGAAAAAAAGTTGATTCAGCCTTTTTCTGGTGCAGAAATTCAAGAAAATATGAATAAATTTGTAGGAGAAATTGTTCAAGTGCCTCCAATTTATTCTGCTGTTAAAGTGAATGGTAAACATCTTTATGAATATGCGCGTGAAGGAATTGAAGTTGAACGGCCTCAGAGAAGGGTTGAAGTCAAACAATATGATCTAACTAAAGAACCAGTTTTTGATATAAATACTGGACAAGAAAGCTTTGATTTTAAGATTAAATGCAGCAAAGGCACTTATGTTAGATCGTTAGTTAATGATCTAGGTGAAAAATTAGATTGCCCCGCAACGATGACTTATTTGAGAAGAACAGCTAGTTCTGGCTTTGATATTACACAAGCAGTAAAATTAAAGGAGATTGAAGAGAATCCGGAAAAGGCCACTGAACTTATACAGCCGATTGATGCATTTTTTAAGGAATACACTCAGGTTGATTTAACTGAAGAAAAGTGGCTTAAAGTTAAAAATGGAGCAGGTATTTCGCTTGAAACTAATGCGAAAAAAGTTGCACTACGATACAATAAAAAGGTGAAAGCAATTTATGAAAAAAAAGGAAAGCTTTATCGCCCAAGCTTAATGCTGTTGCAAAATGAATAA
PROTEIN sequence
Length: 298
MLNGILVIDKDKGMTSADVVYHLRRVLNIRKIGHAGTLDPEVTGVLPIAIGQATKLIEMMHTRPKEYIGTGLFGYSTDSYDATGTVLKEKKLIQPFSGAEIQENMNKFVGEIVQVPPIYSAVKVNGKHLYEYAREGIEVERPQRRVEVKQYDLTKEPVFDINTGQESFDFKIKCSKGTYVRSLVNDLGEKLDCPATMTYLRRTASSGFDITQAVKLKEIEENPEKATELIQPIDAFFKEYTQVDLTEEKWLKVKNGAGISLETNAKKVALRYNKKVKAIYEKKGKLYRPSLMLLQNE*