ggKbase home page

NECEvent2014_10_1_scaffold_49

Alias: Felix_001_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_49_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
Transposase, IS4 family n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XI99_9LACO
transposase
Transposase, IS4 family {ECO:0000313|EMBL:EEU20333.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 125-2-CH
NECEvent2014_10_1_scaffold_49_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

276..2531
DNA (2256bp) protein (752aa)
Surface anchor protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EE73_9LACO rbh
Surface anchor protein {ECO:0000313|EMBL:EST02950.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;
fmtB; cell surface protein
NECEvent2014_10_1_scaffold_49_3
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2721..2897
DNA (177bp) protein (59aa)
Uncharacterized protein n=5 Tax=Lactobacillus RepID=F0TE34_LACA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ60031.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain
NECEvent2014_10_1_scaffold_49_4
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2894..3241
DNA (348bp) protein (116aa)
Transposase ORF_A n=2 Tax=Lactobacillus RepID=E4SNT9_LACAR
transposase ORF_A
Transposase ORF_A {ECO:0000313|EMBL:ADQ60030.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain GRL 1
NECEvent2014_10_1_scaffold_49_5
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3487..4815
DNA (1329bp) protein (443aa)
Transposase n=1 Tax=Lactobacillus johnsonii DPC 6026 RepID=F4AC99_LACJH rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AEB93150.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
NECEvent2014_10_1_scaffold_49_6
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4896..6125)
DNA (1230bp) protein (410aa)
Permease n=1 Tax=Lactobacillus amylovorus (strain GRL 1112) RepID=E4SIR3_LACAR rbh
permease rbh
Permease {ECO:0000313|EMBL:ADQ59062.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain GRL 1112).;"
NECEvent2014_10_1_scaffold_49_7
Lactobacillus acidophilus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6276..7808)
DNA (1533bp) protein (511aa)
C4-dicarboxylate anaerobic carrier dcuC n=4 Tax=Lactobacillus RepID=F0TE62_LACA3 rbh
C4-dicarboxylate anaerobic carrier dcuC rbh
C4-dicarboxylate anaerobic carrier dcuC {ECO:0000313|EMBL:ADZ07239.1}; TaxID=891391 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ac
NECEvent2014_10_1_scaffold_49_8
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7932..8711)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Lactobacillus amylovorus (strain GRL 1118) RepID=F2LZK5_LACAL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA32008.1}; TaxID=695562 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain
NECEvent2014_10_1_scaffold_49_9
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8848..9180
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Lactobacillus RepID=F0TE64_LACA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ59146.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylovorus (strain
NECEvent2014_10_1_scaffold_49_10
Lactobacillus amylovorus CAG:719, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9183..9605
DNA (423bp) protein (141aa)
Acetyltransferase n=1 Tax=Lactobacillus amylovorus CAG:719 RepID=R5YPI2_9LACO
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CDA26589.1}; TaxID=1263084 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; environmental samples.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_49_11
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9801..9923
DNA (123bp) protein (41aa)
Aryl-alcohol dehydrogenase related enzyme n=1 Tax=Lactobacillus amylovorus CAG:719 RepID=R5YGI4_9LACO
Aryl-alcohol dehydrogenase related enzyme
Aryl-alcohol dehydrogenase related enzyme {ECO:0000313|EMBL:AEA32011.1}; TaxID=695562 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
NECEvent2014_10_1_scaffold_49_12
Lactobacillus amylovorus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10266..11441)
DNA (1176bp) protein (392aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Lactobacillus RepID=E4SK88_LACAR rbh
cyclopropane-fatty-acyl-phospholipid synthase rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ADQ59361.1}; TaxID=695560 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacil
NECEvent2014_10_1_scaffold_49_13
Lactobacillus helveticus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11565..12179)
DNA (615bp) protein (205aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=Lactobacillus helveticus RepID=J4BU88_LACHE rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AFR21838.1}; TaxID=880633 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobaci
NECEvent2014_10_1_scaffold_49_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12244..13275
DNA (1032bp) protein (344aa)
O-methyltransferase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GY74_LACCS rbh
o-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:CBL50733.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1)
NECEvent2014_10_1_scaffold_49_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


13440..14213
DNA (774bp) protein (258aa)
30S ribosomal protein S2 n=10 Tax=Lactobacillus crispatus RepID=D5GY73_LACCS rbh
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 125
NECEvent2014_10_1_scaffold_49_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14247..15272
DNA (1026bp) protein (342aa)
Elongation factor Ts n=2 Tax=Lactobacillus crispatus RepID=D5GY72_LACCS rbh
tsf; elongation factor ts rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacilla
NECEvent2014_10_1_scaffold_49_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15417..16142
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=10 Tax=Lactobacillus crispatus RepID=D5GY71_LACCS rbh
pyrH; uridylate kinase rbh
NECEvent2014_10_1_scaffold_49_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16142..16699
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EE57_9LACO rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1328863 species="Bacteria;
frr; ribosome-recycling factor
NECEvent2014_10_1_scaffold_49_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16702..17436
DNA (735bp) protein (245aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactoba
Isoprenyl transferase n=2 Tax=Lactobacillus crispatus RepID=D5GY69_LACCS rbh
uppS; undecaprenyl pyrophosphate synthetase rbh
NECEvent2014_10_1_scaffold_49_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17439..18254
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EJJ5_9LACO rbh
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EST02928.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispa
cdsA; CDP-diglyceride synthetase rbh
NECEvent2014_10_1_scaffold_49_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18267..19523
DNA (1257bp) protein (419aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillu
Membrane-associated zinc metalloprotease n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GY67_LACCS rbh
membrane-associated zinc metalloprotease
NECEvent2014_10_1_scaffold_49_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19551..21248
DNA (1698bp) protein (566aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=9 Tax=Lactobacillus crispatus RepID=C2KFV5_9LACO rbh
proS; prolyl-tRNA synthetase
NECEvent2014_10_1_scaffold_49_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21254..25564
DNA (4311bp) protein (1437aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=748671 species="Bacteria; Firmicut
DNA polymerase III polC-type n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GY65_LACCS rbh
polC; DNA polymerase iii, alpha subunit rbh
NECEvent2014_10_1_scaffold_49_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25633..26151
DNA (519bp) protein (173aa)
Ribosome maturation factor RimP n=2 Tax=Lactobacillus crispatus RepID=C2KFV3_9LACO rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.
hypothetical protein
NECEvent2014_10_1_scaffold_49_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26171..27364
DNA (1194bp) protein (398aa)
Transcription termination-antitermination factor NusA n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GY63_LACCS rbh
nusA; transcription termination-antitermination factor nusa rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sourc
NECEvent2014_10_1_scaffold_49_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27374..27670
DNA (297bp) protein (99aa)
Nucleic-acid-binding protein implicated in transcription termination n=11 Tax=Lactobacillus crispatus RepID=D5GY62_LACCS
nucleic-acid-binding protein implicated in transcription termination
Uncharacterized protein {ECO:0000313|EMBL:EEU19961.1}; TaxID=575595 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus 125-2-CH
NECEvent2014_10_1_scaffold_49_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27673..27984
DNA (312bp) protein (104aa)
Ribosomal protein L7A family n=11 Tax=Lactobacillus crispatus RepID=D5GY61_LACCS
ribosomal protein l7a family
Ribosomal protein L7A family {ECO:0000313|EMBL:CBL50720.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (st
NECEvent2014_10_1_scaffold_49_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27989..30592
DNA (2604bp) protein (868aa)
Translation initiation factor IF-2 n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GY60_LACCS rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacill
infB; translation initiation factor if-2 rbh
NECEvent2014_10_1_scaffold_49_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30612..30977
DNA (366bp) protein (122aa)
Ribosome-binding factor A n=2 Tax=Lactobacillus crispatus RepID=D5GY59_LACCS
rbfA; ribosome-binding factor a
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
NECEvent2014_10_1_scaffold_49_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31033..31926
DNA (894bp) protein (298aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EJI7_9LACO rbh
truB; tRNA pseudouridine synthase b rbh
Displaying items 1-30 of 41 in total

View Taxonomy