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NECEvent2014_10_1_scaffold_52_11

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10551..10808)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=4 Tax=Lactobacillus crispatus RepID=D5H2S3_LACCS similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 161
  • Evalue 3.70e-37
rpsT; 30S ribosomal protein s20 similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 161
  • Evalue 1.00e-37
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 85.0
  • Bit_score: 161
  • Evalue 5.10e-37

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 258
ATGCCACAAATCAAATCAGCTATCAAACGTGTTAAGACTCAAAACGCTACTAACGAACGCCGCGCTTCTGAATTAAGCAAGTTAAGAACTGCTATCAAGAAGTTTAAGAACGCTGTTGAAAGTGATAGTAAGGAAGACGTCTCCAAGTTGCATTTAGAAGCTGAACGTGCTTTGGATAAGGCTGTTTCAAAAGGCTTAATCCACAAGAACAAGGCTGCTCGTGACAAGAGTCGTTTAAACAAGTTAGCAAACAAGTAA
PROTEIN sequence
Length: 86
MPQIKSAIKRVKTQNATNERRASELSKLRTAIKKFKNAVESDSKEDVSKLHLEAERALDKAVSKGLIHKNKAARDKSRLNKLANK*