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NECEvent2014_10_1_scaffold_52

Alias: Felix_001_scaffold_52

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_52_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(137..682)
DNA (546bp) protein (182aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def2; peptide deformylase
NECEvent2014_10_1_scaffold_52_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

944..2788
DNA (1845bp) protein (615aa)
GTP-binding protein TypA n=8 Tax=Lactobacillus crispatus RepID=D5H2R4_LACCS rbh
typA; GTP-binding protein typa
GTP-binding protein TypA {ECO:0000313|EMBL:EEJ70466.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.
NECEvent2014_10_1_scaffold_52_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2888..4072
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=C7Y2I8_9LACO rbh
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EEX30392.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus
ftsW; cell division protein ftsw rbh
NECEvent2014_10_1_scaffold_52_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4069..4413
DNA (345bp) protein (115aa)
Conserved protein n=11 Tax=Lactobacillus crispatus RepID=D5H2R6_LACCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEX30393.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
NECEvent2014_10_1_scaffold_52_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4410..4958
DNA (549bp) protein (183aa)
Methyltransferase n=7 Tax=Lactobacillus crispatus RepID=D5H2R7_LACCS rbh
rsmD; methyltransferase
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EKB69774.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
NECEvent2014_10_1_scaffold_52_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4961..5446
DNA (486bp) protein (162aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=2 Tax=Lactobacillus crispatus RepID=D5H2R8_LACCS rbh
coaD; phosphopantetheine adenylyltransferase rbh
NECEvent2014_10_1_scaffold_52_7
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5439..6482
DNA (1044bp) protein (348aa)
ATP-dependent protease La n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2R9_LACCS rbh
ATP-dependent protease la rbh
ATP-dependent protease La {ECO:0000313|EMBL:CBL50304.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strai
NECEvent2014_10_1_scaffold_52_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6549..7247
DNA (699bp) protein (233aa)
Competence protein ComEA n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2S0_LACCS rbh
comEA; competence protein comea rbh
Competence protein ComEA {ECO:0000313|EMBL:CBL50305.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
NECEvent2014_10_1_scaffold_52_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7216..9504
DNA (2289bp) protein (763aa)
Competence protein ComEC n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2S1_LACCS rbh
Competence protein ComEC {ECO:0000313|EMBL:CBL50306.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain
comEC; competence protein comec rbh
NECEvent2014_10_1_scaffold_52_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9501..10487
DNA (987bp) protein (329aa)
DNA polymerase III, delta subunit n=9 Tax=Lactobacillus crispatus RepID=D5H2S2_LACCS rbh
holA; DNA polymerase iii, delta subunit
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBL50307.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatu
NECEvent2014_10_1_scaffold_52_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(10551..10808)
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=4 Tax=Lactobacillus crispatus RepID=D5H2S3_LACCS
rpsT; 30S ribosomal protein s20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV
NECEvent2014_10_1_scaffold_52_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11010..11279
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=9 Tax=Lactobacillus crispatus RepID=D5H2S4_LACCS
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
NECEvent2014_10_1_scaffold_52_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11437..13227
DNA (1791bp) protein (597aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GDH5_9LACO rbh
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EST04102.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
metallo-beta-lactamase superfamily protein rbh
NECEvent2014_10_1_scaffold_52_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13230..14063
DNA (834bp) protein (278aa)
Bs ysoa-like protein with tpr repeats n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EMD8_9LACO rbh
Bs ysoa-like protein with tpr repeats {ECO:0000313|EMBL:EST04103.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
bs_ysoa-like protein with tpr repeats rbh
NECEvent2014_10_1_scaffold_52_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14253..15443
DNA (1191bp) protein (397aa)
Elongation factor Tu n=3 Tax=Lactobacillus crispatus RepID=D5H2S7_LACCS rbh
tufA; elongation factor tu rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacilla
NECEvent2014_10_1_scaffold_52_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15589..16920
DNA (1332bp) protein (444aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=5 Tax=Lactobacillus crispatus RepID=D5H2S8_LACCS rbh
tig; trigger factor
NECEvent2014_10_1_scaffold_52_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17025..18314
DNA (1290bp) protein (430aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=10 Tax=Lactobacillus crispatus RepID=C2KC62_9LACO rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacilla
clpX; ATP-dependent clp protease ATP-binding subunit clpx
NECEvent2014_10_1_scaffold_52_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18304..18894
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB n=2 Tax=Lactobacillus crispatus RepID=D5H2T0_LACCS rbh
engB; GTP-binding protein engb rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillu
NECEvent2014_10_1_scaffold_52_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19058..19276
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Lactobacillus crispatus RepID=D4FGQ5_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEJ70483.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
amino acid permease-associated protein
NECEvent2014_10_1_scaffold_52_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19502..20212
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Lactobacillus crispatus RepID=D4FGQ6_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EEX30408.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
amino acid transporter
NECEvent2014_10_1_scaffold_52_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20349..21353)
DNA (1005bp) protein (335aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=11 Tax=Lactobacillus crispatus RepID=D5H2T4_LACCS rbh
dapF; diaminopimelate epimerase rbh
NECEvent2014_10_1_scaffold_52_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21362..22747)
DNA (1386bp) protein (462aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
Aspartokinase n=9 Tax=Lactobacillus crispatus RepID=C2KC67_9LACO rbh
lysC1; aspartokinase
NECEvent2014_10_1_scaffold_52_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23176..24486
DNA (1311bp) protein (437aa)
Diaminopimelate decarboxylase n=7 Tax=Lactobacillus crispatus RepID=C2KC68_9LACO rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
lysA; diaminopimelate decarboxylase rbh
NECEvent2014_10_1_scaffold_52_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24501..25208
DNA (708bp) protein (236aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2T7_LACCS rbh
dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase rbh
NECEvent2014_10_1_scaffold_52_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25210..26364
DNA (1155bp) protein (385aa)
N-acetyldiaminopimelate deacetylase {ECO:0000256|HAMAP-Rule:MF_01692, ECO:0000256|SAAS:SAAS00009922}; EC=3.5.1.47 {ECO:0000256|HAMAP-Rule:MF_01692, ECO:0000256|SAAS:SAAS00009917};; TaxID=575597 specie
N-acetyldiaminopimelate deacetylase n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DEW7_9LACO rbh
peptidase, m20/m25/m40 family rbh
NECEvent2014_10_1_scaffold_52_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26366..27292
DNA (927bp) protein (309aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H2T9_LACCS rbh
dapA; dihydrodipicolinate synthase rbh
NECEvent2014_10_1_scaffold_52_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27299..28078
DNA (780bp) protein (260aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=8 Tax=Lactobacillus crispatus RepID=C2KC72_9LACO rbh
dapB; dihydrodipicolinate reductase rbh
NECEvent2014_10_1_scaffold_52_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28090..29265
DNA (1176bp) protein (392aa)
Aspartate aminotransferase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5ENF6_9LACO rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EST03444.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-L
patA1; aspartate aminotransferase rbh
NECEvent2014_10_1_scaffold_52_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29265..30323
DNA (1059bp) protein (353aa)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Lactobacillus crispatus RepID=D5H2U2_LACCS rbh
asd; aspartate-semialdehyde dehydrogenase rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:CBL50327.1}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_
NECEvent2014_10_1_scaffold_52_30
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30486..31529
DNA (1044bp) protein (348aa)
Penicillin-binding protein n=2 Tax=Lactobacillus crispatus RepID=D5H2U3_LACCS rbh
penicillin-binding protein rbh
Penicillin-binding protein {ECO:0000313|EMBL:CBL50328.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (stra
Displaying items 1-30 of 44 in total

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