ggKbase home page

NECEvent2014_10_1_scaffold_55_45

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(44841..45101)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family n=1 Tax=Lactobacillus amylolyticus DSM 11664 RepID=D4YUE2_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 139
  • Evalue 2.00e-30
Transposase, IS4 family {ECO:0000313|EMBL:EFG55207.1}; TaxID=585524 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus amylolyticus DSM 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 139
  • Evalue 2.80e-30
transposase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 83.0
  • Bit_score: 126
  • Evalue 2.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus amylolyticus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 261
ATGGATAATATTATCAATAAAATCGCCACTAATATTCATGCTTTCTCTGTTTCAGATCAGGCCTTTACCCGTTGTCGTAAGCTCAATGTCGTTGATTTGATTAGGCTGATTCTAAACATGGGAGCCGGCAGTTTGAACTCGGAAATTTTTCATGCTTTTCCTAACATAAATTCTAGAATGACCGCTTCGGCTTTCGAACAACAAAAGCAAGGAATATTTTTCAAGGCAAAGATGGTAGAAAATATTGTCAGATCCATGTAA
PROTEIN sequence
Length: 87
MDNIINKIATNIHAFSVSDQAFTRCRKLNVVDLIRLILNMGAGSLNSEIFHAFPNINSRMTASAFEQQKQGIFFKAKMVENIVRSM*