ggKbase home page

NECEvent2014_10_1_scaffold_57_2

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 922..1734

Top 3 Functional Annotations

Value Algorithm Source
Raffinose operon transcriptional regulator n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EF68_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 270.0
  • Bit_score: 550
  • Evalue 6.80e-154
  • rbh
Raffinose operon transcriptional regulator {ECO:0000313|EMBL:EST03285.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 270.0
  • Bit_score: 550
  • Evalue 9.60e-154
raffinose operon transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 270.0
  • Bit_score: 544
  • Evalue 1.80e-152
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCTAACTTAAACATTCAAAACCTTGAAAGCTACATCATGTTTTACGGCCGGCAAAAATGTCAGCCTGATGAATTCTTTCAAGGTGACAATCTTCGTAAGAACGATATCTTTTATTACATTATTAGTGGAACTGGCAGCTTTACTTCTAGTAGACACCACGCAGTCAAATTAAAAGCTGGCGATCTTTTTTACGTCCCGCGCAATCAAACTTGTTCTTTCCAAGCTGACCATGATGAACCCTGGGAATACTTCTGGATTGGCCTAGCTGGCAACGGCGTTAATGAAAGCATCAAGGCATCAAATTTACCTAATAAAAATTTCTTGCGTCAAATTCGAAAAACTGCCTTTTATCAAACCCTAGATGACCTTTATCAATGTTTGGCGAAGAAAAAGACCTTATTAAACAATTTAAAAATTTCAGCTTTAACTTATCAACTTTTTTATCATCTAGTAAAAGACTTTCCTAACCATCCACCGGTCCGCAAAACACCGAAAAATGATCAGTATCAAATTGCCATTAACTATCTCAAGCAAAATTATACCGATCCTACCTGCAATATTGTCGAACTCTGTCATAGATTAGGCGTATCACGCAGCTTTCTATATGCTTTATTCAGAAAAAACACTAAATTATCACCTCAAAAGTACCTCATGCAATTGCGCATGGAAGCCGCTAAGAAAGAATTAACTAATACCACACACAATCTAAAGCAAATTGCCAAAAAAGTCGGCTACGGCGATGAATTTACCTTCTCCAAGGCATTTAAACGCTATAGCGGTGTTAGTCCAAATGCCTTTCGGGGAAATTAA
PROTEIN sequence
Length: 271
MPNLNIQNLESYIMFYGRQKCQPDEFFQGDNLRKNDIFYYIISGTGSFTSSRHHAVKLKAGDLFYVPRNQTCSFQADHDEPWEYFWIGLAGNGVNESIKASNLPNKNFLRQIRKTAFYQTLDDLYQCLAKKKTLLNNLKISALTYQLFYHLVKDFPNHPPVRKTPKNDQYQIAINYLKQNYTDPTCNIVELCHRLGVSRSFLYALFRKNTKLSPQKYLMQLRMEAAKKELTNTTHNLKQIAKKVGYGDEFTFSKAFKRYSGVSPNAFRGN*