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NECEvent2014_10_1_scaffold_57

Alias: Felix_001_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_57_1
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(170..799)
DNA (630bp) protein (210aa)
Resolvase, N terminal domain family protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5GZV3_LACCS rbh
resolvase, n terminal domain family protein rbh
Resolvase, N terminal domain family protein {ECO:0000313|EMBL:CBL51312.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
NECEvent2014_10_1_scaffold_57_2
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

922..1734
DNA (813bp) protein (271aa)
Raffinose operon transcriptional regulator n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EF68_9LACO rbh
Raffinose operon transcriptional regulator {ECO:0000313|EMBL:EST03285.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
raffinose operon transcriptional regulator rbh
NECEvent2014_10_1_scaffold_57_3
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1821..3245
DNA (1425bp) protein (475aa)
Dipeptidase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0Z7_LACCS rbh
pepDA; dipeptidase
Dipeptidase {ECO:0000313|EMBL:CBL49682.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_57_4
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3299..3874)
DNA (576bp) protein (192aa)
Acetyltransferase, gnat family n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EKE1_9LACO rbh
Acetyltransferase, gnat family {ECO:0000313|EMBL:EST03283.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
acetyltransferase, gnat family rbh
NECEvent2014_10_1_scaffold_57_5
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3889..5217)
DNA (1329bp) protein (443aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=6 Tax=Lactobacillus crispatus RepID=D5H0Z5_LACCS rbh
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
NECEvent2014_10_1_scaffold_57_6
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5319..6938)
DNA (1620bp) protein (540aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0Z4_LACCS rbh
pyrG; ctp synthase rbh
NECEvent2014_10_1_scaffold_57_7
Lactobacillus ultunensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7055..7639)
DNA (585bp) protein (195aa)
Probable DNA-directed RNA polymerase subunit delta n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EQM8_9LACO rbh
Probable DNA-directed RNA polymerase subunit delta {ECO:0000256|HAMAP-Rule:MF_00357, ECO:0000256|SAAS:SAAS00194236}; RNAP delta factor {ECO:0000256|HAMAP-Rule:MF_00357}; TaxID=525365 species="Bacteria
rpoE; DNA-directed RNA polymerase, delta subunit rbh
NECEvent2014_10_1_scaffold_57_8
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7662..8087)
DNA (426bp) protein (142aa)
YD repeat (Two copies) n=2 Tax=Lactobacillus crispatus RepID=K1LX69_9LACO
YD repeat (Two copies) {ECO:0000313|EMBL:EKB80656.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB077-07.
hypothetical protein
NECEvent2014_10_1_scaffold_57_9
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8181..9554
DNA (1374bp) protein (458aa)
HD superfamily phosphohydrolase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0Z1_LACCS rbh
hd superfamily phosphohydrolase rbh
HD superfamily phosphohydrolase {ECO:0000313|EMBL:CBL49676.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus
NECEvent2014_10_1_scaffold_57_10
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9586..9864
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Lactobacillus crispatus RepID=C2KDR0_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EFQ43784.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus CTV-05.;
hypothetical protein
NECEvent2014_10_1_scaffold_57_11
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9925..10845)
DNA (921bp) protein (307aa)
Uncharacterized protein n=4 Tax=Lactobacillus crispatus RepID=K1MGH2_9LACO rbh
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EKB80653.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB077-07
NECEvent2014_10_1_scaffold_57_12
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11007..11963)
DNA (957bp) protein (319aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=7 Tax=Lactobacillus crispatus RepID=D5H0Y8_LACCS rbh
prs2; ribose-phosphate pyrophosphokinase
NECEvent2014_10_1_scaffold_57_13
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12209..13993)
DNA (1785bp) protein (595aa)
Cell separation protein n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZF6_9LACO rbh
Cell separation protein {ECO:0000313|EMBL:EST03271.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
cell separation protein rbh
NECEvent2014_10_1_scaffold_57_14
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14088..14297)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Lactobacillus crispatus 2029 RepID=V7Z1R7_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEJ69938.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus JV-V01.;
NECEvent2014_10_1_scaffold_57_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14276..14839)
DNA (564bp) protein (188aa)
Uncharacterized protein n=9 Tax=Lactobacillus crispatus RepID=C2KDQ5_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EEX29064.1}; TaxID=575597 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus MV-3A-US
hypothetical protein
NECEvent2014_10_1_scaffold_57_16
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14968..16353)
DNA (1386bp) protein (462aa)
Bifunctional protein GlmU n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0Y5_LACCS rbh
glmU; bifunctional protein glmu rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
NECEvent2014_10_1_scaffold_57_17
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16400..17230)
DNA (831bp) protein (277aa)
Pur operon repressor PurR n=4 Tax=Lactobacillus crispatus RepID=C2KDQ3_9LACO rbh
purR; pur operon repressor rbh
Pur operon repressor {ECO:0000313|EMBL:EST03268.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;"
NECEvent2014_10_1_scaffold_57_18
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17339..17596)
DNA (258bp) protein (86aa)
Veg protein n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0Y3_LACCS
veg; veg protein
Veg protein {ECO:0000313|EMBL:CBL49668.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_57_19
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(17658..18542)
DNA (885bp) protein (295aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZF0_9LACO rbh
ksgA; dimethyladenosine transferase rbh
NECEvent2014_10_1_scaffold_57_20
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18532..19098)
DNA (567bp) protein (189aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=11 Tax=Lactobacillus crispatus RepID=D5H0Y0_LACCS rbh
rnmV; primase-related protein rbh
NECEvent2014_10_1_scaffold_57_21
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19085..19852)
DNA (768bp) protein (256aa)
Hydrolase, tatd family n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EMY1_9LACO rbh
Hydrolase, tatd family {ECO:0000313|EMBL:EST03264.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.;
tatD; hydrolase, tatd family
NECEvent2014_10_1_scaffold_57_22
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19852..21828)
DNA (1977bp) protein (659aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0X8_LACCS rbh
metG; methionyl-tRNA synthetase rbh
NECEvent2014_10_1_scaffold_57_23
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21927..24197)
DNA (2271bp) protein (757aa)
Magnesium-translocating p-type atpase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAV2_9LACO rbh
Magnesium-translocating p-type atpase {ECO:0000313|EMBL:EST03262.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
mgtA; magnesium-translocating p-type atpase rbh
NECEvent2014_10_1_scaffold_57_24
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24228..24596)
DNA (369bp) protein (123aa)
Magnesium-translocating p-type atpase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5GAV2_9LACO
mgtA; magnesium-translocating p-type atpase
Magnesium-translocating p-type atpase {ECO:0000313|EMBL:EST03262.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus cri
NECEvent2014_10_1_scaffold_57_25
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24892..25476)
DNA (585bp) protein (195aa)
Beta-propeller domain of methanol dehydrogenase type n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5DZE4_9LACO rbh
Beta-propeller domain of methanol dehydrogenase type {ECO:0000313|EMBL:EST03261.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="La
beta-propeller domain of methanol dehydrogenase type rbh
NECEvent2014_10_1_scaffold_57_26
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25490..25969)
DNA (480bp) protein (160aa)
dCMP deaminase n=1 Tax=Lactobacillus crispatus (strain ST1) RepID=D5H0X5_LACCS rbh
comEB; dcmp deaminase rbh
dCMP deaminase {ECO:0000313|EMBL:CBL49660.1}; TaxID=748671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus (strain ST1).;"
NECEvent2014_10_1_scaffold_57_27
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25985..27007)
DNA (1023bp) protein (341aa)
Tryptophanyl-tRNA synthetase n=9 Tax=Lactobacillus crispatus RepID=D5H0X4_LACCS rbh
trpS; tryptophanyl-tRNA synthetase rbh
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EKB80753.1}; TaxID=883092 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus FB0
NECEvent2014_10_1_scaffold_57_28
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27119..27718
DNA (600bp) protein (200aa)
Uncharacterized protein n=5 Tax=Lactobacillus crispatus RepID=E3R605_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:EST03258.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1.
hypothetical protein
NECEvent2014_10_1_scaffold_57_trna_1
unknown

Not on your lists

27728..27798
DNA (71bp)
transferRNA
NECEvent2014_10_1_scaffold_57_29
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27846..28517)
DNA (672bp) protein (224aa)
CAAX amino terminal protease family protein n=1 Tax=Lactobacillus crispatus JV-V01 RepID=C2KDP1_9LACO rbh
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEJ69946.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillu
abortive infection protein rbh
Displaying items 1-30 of 44 in total

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