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NECEvent2014_10_1_scaffold_57_7

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7055..7639)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA-directed RNA polymerase subunit delta n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EQM8_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 194.0
  • Bit_score: 377
  • Evalue 9.70e-102
  • rbh
Probable DNA-directed RNA polymerase subunit delta {ECO:0000256|HAMAP-Rule:MF_00357, ECO:0000256|SAAS:SAAS00194236}; RNAP delta factor {ECO:0000256|HAMAP-Rule:MF_00357}; TaxID=525365 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 194.0
  • Bit_score: 376
  • Evalue 3.00e-101
rpoE; DNA-directed RNA polymerase, delta subunit similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 185.0
  • Bit_score: 369
  • Evalue 4.40e-100
  • rbh

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Taxonomy

Lactobacillus ultunensis → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
TTGTATAAGAGAGGACGTACAGCTGTGGGATTAGACAAATTTAAAGACAAAAATCGCGATGAATTGTCAATGATCGAAGTTGCTCGTGCAATTTTGGAAGACAATGGCAAGAGAATGGCATTTGCCGATATTGTTAATGCCGTACAAAAATACTTGAATAAGAGTGACGAAGAAATTCGTGAACGTTTACCACAATTTTATACTAATATGAACACTGATGGTGAATTTATCTCAATGGGTGAAAATGTTTGGGCACTTCGTTCATGGTTCCCATATGAATCAGTTGATGAAGAAGTTAACCACCCTGAGGATGAAGAAGAAGACGATTCACGTAAGCACCATAAGAAGGTTAATGCCTTCTTAGCTAGTGCAACTGGTGATGATGACATTATCGACTACGATAACGATGATCCAGAAGATGACGACTTAGACGCCACAGACGATGATACTGATGACGATTATGGCGACGAAGATTCTGATTATGATGAAGACAACGACGATACTGATGATGTATTGCCAGATGGCATTGAAGGTCAATTGTCACAATTAAATGATGATGATGATGATGACGACGAAGATAATTAA
PROTEIN sequence
Length: 195
LYKRGRTAVGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYTNMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEEEDDSRKHHKKVNAFLASATGDDDIIDYDNDDPEDDDLDATDDDTDDDYGDEDSDYDEDNDDTDDVLPDGIEGQLSQLNDDDDDDDEDN*