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NECEvent2014_10_1_scaffold_57_20

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18532..19098)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 369
  • Evalue 2.80e-99
Ribonuclease M5 n=11 Tax=Lactobacillus crispatus RepID=D5H0Y0_LACCS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 369
  • Evalue 2.00e-99
  • rbh
rnmV; primase-related protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 369
  • Evalue 5.50e-100
  • rbh

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGCTTAAATAAAAAGAATTTTGATGCGGTAATCGTTGTTGAGGGGAAAGACGATACCATCCGTTTAAAACAATTTTTCCCAGGAATCGAGACAATTGAGACTAATGGATCAGCCGTTTCAGATGAAGTATTGAAGCAAATCCAAAAATTAAGTGAGAGTCGGCAAATTATTGTCTTTACTGATCCTGACTTTAATGGCGAAAGAATCCGGCGCATTGTAACTAAAGCTGTTCCTGATGCAAAGCAAGCTTTTATTACCCGTAAGGAAGGCGAACCTCATAAAAAGGGGAGTCTAGGTGTAGAACATGCTTCAAAAGAAGCACTTGAGCATGCACTAAGTGATTTGCATGAGGTTGAACCGCAAAAAAGTGATTTAACTCCAGCAATTTATCGGCAATTAGGTTTAGCTGGTGGTAGCGGCTCACGAAAATTACGTGAACAAGTAGGCATTAAATTACGAGTTGGCTATGGCAATTCCAAGCAGTTTTATAATCGCTTGCATACTTTTGGCGTTTCATTAGCTGAATTAAAGGCAGCTGTCAAGGAGGTAGAAAATGACAAATAA
PROTEIN sequence
Length: 189
MGLNKKNFDAVIVVEGKDDTIRLKQFFPGIETIETNGSAVSDEVLKQIQKLSESRQIIVFTDPDFNGERIRRIVTKAVPDAKQAFITRKEGEPHKKGSLGVEHASKEALEHALSDLHEVEPQKSDLTPAIYRQLGLAGGSGSRKLREQVGIKLRVGYGNSKQFYNRLHTFGVSLAELKAAVKEVENDK*