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NECEvent2014_10_1_scaffold_96_17

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 17018..17374

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=2 Tax=Lactobacillus gasseri RepID=D7V5D7_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 233
  • Evalue 8.10e-59
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 6.60e-59
RNA-binding protein {ECO:0000313|EMBL:AJC08526.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 3.30e-58

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
GTGAAATTTCCAATTGGATTAAGACTTAATGCTAAAGTTAACAATATTACTAAGCTTGGGATTTTTGTGACTTTACCGCACCATCATCATGGCTTGATTTTTCATAAAGATTTTGGTGATAAATGGGAAAGTGCTAGGAACAAGTACAGTATTGGAGATGAGATCAGGGTAGTTATTATCAATAATCGTGAGGGAAAGCTTTCACTCTCTCTGAGTCAAGTAAACAATCCTGATTTGATTGATCCGACTAATGAATTTAAAGATAGTAAAGACTTTACTCCTTTAGCAAAGCTAGTAGAAAGTTCTACAAAGAAAATAGCAGATTTAAAGAACTCAATTGAGTTAAGTGACCAATAA
PROTEIN sequence
Length: 119
VKFPIGLRLNAKVNNITKLGIFVTLPHHHHGLIFHKDFGDKWESARNKYSIGDEIRVVIINNREGKLSLSLSQVNNPDLIDPTNEFKDSKDFTPLAKLVESSTKKIADLKNSIELSDQ*