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NECEvent2014_10_1_scaffold_96

Alias: Felix_001_scaffold_96

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_96_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3..662
DNA (660bp) protein (220aa)
Alpha-galactosidase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S7F9_9LACO
Alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:EFB61969.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
NECEvent2014_10_1_scaffold_96_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

885..1913
DNA (1029bp) protein (343aa)
ABC transporter substrate binding protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V5F2_9LACO rbh
peptide ABC transporter substrate-binding protein rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJC07359.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lacto
NECEvent2014_10_1_scaffold_96_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1910..2809
DNA (900bp) protein (300aa)
Ribose/xylose/arabinose/galactoside ABC-type transporter permease n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQW0_9LACO rbh
branched-chain amino acid ABC transporter permease rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AJC07360.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lact
NECEvent2014_10_1_scaffold_96_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2802..3566
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1RX10_9LACO rbh
phosphonate ABC transporter ATP-binding protein rbh
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC07361.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactoba
NECEvent2014_10_1_scaffold_96_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3652..5265
DNA (1614bp) protein (538aa)
Amino acid permease n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V5E9_9LACO rbh
amino acid transporter rbh
Amino acid permease {ECO:0000313|EMBL:EFB61973.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
NECEvent2014_10_1_scaffold_96_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5383..5634
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B n=7 Tax=Lactobacillus gasseri RepID=RL31B_LACGA
rpmE2; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000255|HAMAP-Rule:MF_00502}; TaxID=324831 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasse
NECEvent2014_10_1_scaffold_96_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5800..7167
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobac
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RZH3_9LACO rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase rbh
NECEvent2014_10_1_scaffold_96_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7198..8640
DNA (1443bp) protein (481aa)
Superfamily II DNA/RNA helicase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQV5_9LACO rbh
superfamily II DNA/RNA helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AJC07365.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_96_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8713..9072
DNA (360bp) protein (120aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier-protein] synthase n=2 Tax=Lactobacillus gasseri RepID=D7V5E5_9LACO
4'-phosphopantetheinyl transferase
NECEvent2014_10_1_scaffold_96_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9072..10202
DNA (1131bp) protein (377aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1403312 species="Bacteria; Firmic
Alanine racemase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SLK4_9LACO rbh
alanine racemase rbh
NECEvent2014_10_1_scaffold_96_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10265..10945)
DNA (681bp) protein (227aa)
CBS domain containing protein n=8 Tax=Lactobacillus gasseri RepID=Q046E6_LACGA rbh
CBS domain-containing protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC08532.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_96_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11088..12059)
DNA (972bp) protein (324aa)
ldh; L-lactate dehydrogenase (EC:1.1.1.27) rbh
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=575604 species="Bacteria; Firmicutes; B
L-lactate dehydrogenase n=5 Tax=Lactobacillus gasseri RepID=Q046E5_LACGA rbh
NECEvent2014_10_1_scaffold_96_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12240..12797
DNA (558bp) protein (186aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQV0_9LACO rbh
peptidyl-tRNA hydrolase rbh
NECEvent2014_10_1_scaffold_96_14
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12799..16296
DNA (3498bp) protein (1166aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403312 species="Bacteria; F
Transcription-repair-coupling factor n=1 Tax=Lactobacillus gasseri K7 RepID=S1RX00_9LACO rbh
transcription-repair coupling factor rbh
NECEvent2014_10_1_scaffold_96_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16310..16552
DNA (243bp) protein (81aa)
S4 domain protein n=2 Tax=Lactobacillus gasseri RepID=D7V5D9_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC08528.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_96_16
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16641..17018
DNA (378bp) protein (126aa)
Septum formation initiator n=8 Tax=Lactobacillus gasseri RepID=Q046E1_LACGA
septum formation initiator
Putative septum formation initiator subfamily {ECO:0000313|EMBL:KFL96789.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacil
NECEvent2014_10_1_scaffold_96_17
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17018..17374
DNA (357bp) protein (119aa)
S1 RNA binding domain protein n=2 Tax=Lactobacillus gasseri RepID=D7V5D7_9LACO
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:AJC08526.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_96_18
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17396..18691
DNA (1296bp) protein (432aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQU5_9LACO rbh
tRNA(Ile)-lysidine synthetase rbh
NECEvent2014_10_1_scaffold_96_19
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18775..20901
DNA (2127bp) protein (709aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactob
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Lactobacillus gasseri K7 RepID=S1RWZ7_9LACO rbh
cell division protein FtsH rbh
NECEvent2014_10_1_scaffold_96_20
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20984..23683
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SLJ5_9LACO rbh
Membrane protein {ECO:0000313|EMBL:AJC08523.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
membrane protein rbh
NECEvent2014_10_1_scaffold_96_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23905..24780
DNA (876bp) protein (292aa)
33 kDa chaperonin n=1 Tax=Lactobacillus gasseri K7 RepID=S1S7C7_9LACO rbh
heat shock protein Hsp33 rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1403312 species="Bacteria; Firmicutes; Bacill
NECEvent2014_10_1_scaffold_96_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24840..25847
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lact
tRNA-dihydrouridine synthase n=2 Tax=Lactobacillus gasseri RepID=D7V5D2_9LACO rbh
tRNA-dihydrouridine synthase rbh
NECEvent2014_10_1_scaffold_96_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25862..27403
DNA (1542bp) protein (514aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6) rbh
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Lactobacillus gasseri K7 RepID=S1SQT7_9LACO rbh
NECEvent2014_10_1_scaffold_96_trna_1
unknown

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27504..27575
DNA (72bp)
transferRNA
NECEvent2014_10_1_scaffold_96_trna_2
unknown

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27619..27692
DNA (74bp)
transferRNA
NECEvent2014_10_1_scaffold_96_24
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27856..28197
DNA (342bp) protein (114aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V5D0_9LACO
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Negative regulator of genetic competence ClpC/MecB {ECO:0000313|EMBL:KFL96772.1}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lacto
Displaying 26 items

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