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NECEvent2014_10_1_scaffold_235_1

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 192..710

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=8 Tax=Lactobacillus gasseri RepID=Q041V1_LACGA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 333
  • Evalue 1.40e-88
  • rbh
infC; translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 333
  • Evalue 4.00e-89
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacill similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 333
  • Evalue 2.00e-88

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
ATGATCTTAAACGAAGATATTCGTGCTCGTGAAGTTCGTTTAATTGGAGTTGATGGCCAACAAATTGGTGTCGTTTCTAAGAATGAAGCTTTACGTAAAGCAGCTGACGCTGACCTTGATTTGGTTTTGCTTTCTCCTAATGCTAAGCCACCTGTTGCTAGAATTATGGACTACGGTAAATTCCGTTTTGAACAACAAAAGAAAGCCAAAGAAAACCGTAAGAATCAAAAGGTTATGGCTGTCAAAGAAATTCGTTTAAGTCCAACAATCGAAGGCAATGACTTTGACACTAAGTTAAAGCATGTTCGTAAATTCTTGACCAAGGGCGCTAAAGTTAGAGTTTCTATTCGCTTTAGAGGCCGGGCAATTACTCACAAGGAGTTAGGTAAACAGGTCTTAGAGAAGATGGCTGATGAAGCTAGTGACTTATCTAATGTAGTTACTAAGCCTAAGATGGAAGGCCGTTCAATGTTCTTAATGCTTGCTCCATTAAGTGAGAAAGATAAAAAGAAAAAGTAG
PROTEIN sequence
Length: 173
MILNEDIRAREVRLIGVDGQQIGVVSKNEALRKAADADLDLVLLSPNAKPPVARIMDYGKFRFEQQKKAKENRKNQKVMAVKEIRLSPTIEGNDFDTKLKHVRKFLTKGAKVRVSIRFRGRAITHKELGKQVLEKMADEASDLSNVVTKPKMEGRSMFLMLAPLSEKDKKKK*