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NECEvent2014_10_1_scaffold_235

Alias: Felix_001_scaffold_235

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_235_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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192..710
DNA (519bp) protein (173aa)
Translation initiation factor IF-3 n=8 Tax=Lactobacillus gasseri RepID=Q041V1_LACGA rbh
infC; translation initiation factor IF-3 rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacill
NECEvent2014_10_1_scaffold_235_2
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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729..929
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=15 Tax=Lactobacillus RepID=RL35_LACGA
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1037411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
NECEvent2014_10_1_scaffold_235_3
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


962..1318
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=12 Tax=Lactobacillus RepID=D0R5D1_LACJF
rplT; ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" sou
NECEvent2014_10_1_scaffold_235_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1359..2366)
DNA (1008bp) protein (336aa)
Adenosine deaminase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S9M9_9LACO rbh
adenosine deaminase rbh
Adenosine deaminase {ECO:0000313|EMBL:AJC07523.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_235_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2530..3048
DNA (519bp) protein (173aa)
HAD superfamily hydrolase n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1K0_9LACO rbh
HAD family hydrolase rbh
HAD family hydrolase {ECO:0000313|EMBL:AJC07524.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_235_6
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3045..4154
DNA (1110bp) protein (370aa)
Ribosome biogenesis GTPase YqeH n=2 Tax=Lactobacillus gasseri RepID=D7V1Y9_9LACO rbh
GTPase rbh
GTPase {ECO:0000313|EMBL:AJC07525.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_235_7
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4154..4780
DNA (627bp) protein (209aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Lactobacillus gasseri RepID=D7V1Z0_9LACO rbh
nicotinic acid mononucleotide adenylyltransferase
NECEvent2014_10_1_scaffold_235_8
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4773..5369
DNA (597bp) protein (199aa)
Hydrolase, HD family n=2 Tax=Lactobacillus gasseri RepID=D7V1Z1_9LACO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC07527.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_235_9
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5393..5740
DNA (348bp) protein (116aa)
Ribosomal silencing factor RsfS n=2 Tax=Lactobacillus gasseri RepID=D7V1Z2_9LACO
Iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasse
NECEvent2014_10_1_scaffold_235_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5751..6908
DNA (1158bp) protein (386aa)
UPF0348 protein LK7_01581 n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1J5_9LACO rbh
hypothetical protein rbh
UPF0348 protein P906_02620 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 13
NECEvent2014_10_1_scaffold_235_11
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6908..7456
DNA (549bp) protein (183aa)
Metal-binding protein, inactivated metal-binding site n=1 Tax=Lactobacillus gasseri K7 RepID=S1ST58_9LACO rbh
DNA-binding protein rbh
DNA-binding protein {ECO:0000313|EMBL:AJC07530.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
NECEvent2014_10_1_scaffold_235_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7541..7891
DNA (351bp) protein (117aa)
Response regulator receiver domain protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V1Z5_9LACO
PhoB family transcriptional regulator
PhoB family transcriptional regulator {ECO:0000313|EMBL:AJC07531.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gas
Displaying 12 items

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