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NECEvent2014_10_1_scaffold_235_9

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 5393..5740

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=2 Tax=Lactobacillus gasseri RepID=D7V1Z2_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 233
  • Evalue 7.90e-59
Iojap family protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 232
  • Evalue 4.90e-59
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasse similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 232
  • Evalue 2.50e-58

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 348
TTGGATAGCAAGAAATTATTAGATTTAACCGTAGAAGCAATTGATGAGAGACATGGTGAAGATACTGAAGCATATGATATGCAAGGAATTAGTATTTTAGCAGATTACTATGTTGTAACTACTGCAGGCTCAAATCGTCAACTTCATGCAATTGTTAATAGCATTATTGATAAAATTCATGAACAAGGAAAAGAAGATTACCGTATTGAAGGAACACGTGATTCTAACTGGCTTTTAGTAGATATGGGAGATGTAGTTGTAAATGTCTTCACTGCGGATGCTAGAGACTTTTATGGCTTGGAAAAGCTCTGGAGCAATGGTAAGAAGTTAGAATTAAACTTAGATTAA
PROTEIN sequence
Length: 116
LDSKKLLDLTVEAIDERHGEDTEAYDMQGISILADYYVVTTAGSNRQLHAIVNSIIDKIHEQGKEDYRIEGTRDSNWLLVDMGDVVVNVFTADARDFYGLEKLWSNGKKLELNLD*